Saccharophagus degradans: Sde_0844
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Entry
Sde_0844 CDS
T00335
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
sde
Saccharophagus degradans
Pathway
sde00300
Lysine biosynthesis
sde00550
Peptidoglycan biosynthesis
sde01100
Metabolic pathways
sde01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Sde_0844
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Sde_0844
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Sde_0844
Enzymes [BR:
sde01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
Sde_0844
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
ABD80106
UniProt:
Q21MH3
LinkDB
All DBs
Position
1096411..1097787
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AA seq
458 aa
AA seq
DB search
MELSLQALAERFGGEIVYPGEAYNITFSSINTDTRAINHGDVFIALKGPNFDGHNYLDVA
TRKGAAAAIVETPNTNLDLPQWCVGDSYKALGELGLASREKFNGKVIGVTGSCGKTTVKG
MLAAICSLAGSTVATRGNLNNHIGVPLSLMRLANEHQFAVIEAGTSGPNEIKYLAELIQP
HVAIVNNIMPVHVEGFGSVEAIAIDKAHLYRGLVEGGVGVLNVASAQQPTLLDALQGKKI
TRFNPELTDEAAEVRVQNIEQDTFGRAEFSAIIEGEEVELKLGVLGAHNVANALAAASAA
RAVGISVELIKRGLEKYTGDKGRMQLARVNEKLTVIDDTYNASPGSVKAAIDYAAQFERS
AIVLGDMGELGEMRNSAHEEIGRYAQQKQIKQLWCTGEASRFTAQGYGPHAKWFEDKEQL
KQALPMLCSSEVVVLVKGSRSTRMEQIVNALLASGEQK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaattatctttacaggcattggcagaaagatttggcggcgaaattgtataccctgga
gaggcatacaatattacattctcgtccatcaatactgacacccgagcgataaatcacggc
gacgtgtttattgcgttgaagggaccgaattttgatgggcacaattatttggatgtagcc
acccgaaagggggccgcagcagccatagtagaaacgccgaacaccaatttagatttaccg
caatggtgtgtgggtgatagctacaaagcgcttggcgaactaggcctagcgagtagagaa
aaatttaatggcaaggtgattggtgtaaccggcagctgcggtaaaaccactgtgaagggc
atgctggcagcgatttgttccttggctggttcaaccgtggccaccagaggaaatttgaac
aaccacattggcgtgccgctatcgttgatgcgcctggccaatgagcaccagttcgcagtc
attgaggcgggcacaagcgggccaaatgaaattaagtatttggccgaacttattcagcct
catgtggccattgtaaataacatcatgcctgtgcatgtagagggctttggctcggttgaa
gcaatagctatagataaagcacacctctatcgcggcctagttgaaggtggtgtaggtgtg
cttaacgttgctagtgctcagcagcctactttattagatgctttgcagggcaaaaaaata
actcgatttaatcccgagttaacagatgaagccgccgaagtgcgtgtccagaacattgag
caagacacttttggccgcgcagagtttagcgcgattattgaaggtgaagaggttgagtta
aagcttggcgtgctcggtgcccacaacgtagctaacgctttggctgcagcaagtgcggcg
cgcgcggttggcataagcgttgagctaattaagcgtgggctagaaaaatacaccggcgat
aagggtcgtatgcagcttgcgcgtgtaaatgaaaagctaacggtaatagacgatacctat
aacgccagcccgggctcagtaaaagcggccatagactacgctgcgcaatttgagcgcagt
gccatcgtcttaggcgatatgggagagctgggtgaaatgcgcaattcggcgcatgaagaa
attgggcgttacgcccaacaaaaacaaattaaacaattgtggtgtaccggcgaagcgagt
cggtttacagcacaaggttacggtccgcacgctaaatggtttgaagataaagagcagcta
aagcaagcgctgccaatgctctgttcgtccgaagtggtggttttagtaaaaggttcgcgc
agtacgcgaatggaacagatagttaatgctctattagcgagcggagaacaaaaataa
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