Saccharophagus degradans: Sde_0905
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Entry
Sde_0905 CDS
T00335
Name
(GenBank) transcriptional regulator, LacI family
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sde03000
]
Sde_0905
Transcription factors [BR:
sde03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Sde_0905
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
ABC_sub_bind
RRM_8
PFK
Motif
Other DBs
NCBI-ProteinID:
ABD80167
UniProt:
Q21MB2
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All DBs
Position
1167555..1168562
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AA seq
335 aa
AA seq
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MTLADVAETAGVSAITVSRVINQPDKVSASMRDKVQKAIDKLGYIPNRSASALASARSGV
LGVVIPSLSNAVFNDVLRGIYDVAGPAGYQVLLVDTHYSPMEEERMVRTLLSQAPEAMII
TGGDQTQHTRKMLVKSGVPIVQVMETVESPIDMNVGFSHRQAGYDLVTRLLANGFDRIGF
LGARMDPRAQQRMLGYKQAMDTAGRNYDGLIVTTPKPSSIAMGGELLRSVMSSSNGVCDA
LFACNDDLALGALFECQRMNISVPGDMAICGFNDIETAALVNPSLSSVHVPRYEMGVTAT
EMVLKVLAGNEVENKKIDIGYTIQMRQSTSTDIHW
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaccttggcggatgtggccgaaactgctggtgttagcgcaatcacagtttcgcgtgta
attaatcagccagataaggtttccgctagcatgcgtgataaggtccaaaaggccatcgat
aagttgggctatattcccaaccgttccgcaagcgcgttagcctccgctcgctctggggtg
ttgggggtggttattccctcgttgtccaatgctgtttttaacgatgtgttgcgcggtatc
tacgatgtagcgggccccgctggctatcaagtgctgttggtagatacccattattcgcca
atggaagaagagcgcatggtgcgcaccctgttaagtcaggcgccagaggccatgattatt
accggtggggatcagactcagcacacccgcaaaatgcttgttaaatctggcgtgcccatt
gtgcaggttatggaaaccgtagagagccctatcgatatgaacgtaggtttttctcatcgc
caagcaggttacgatttagtgacgcgcttattggctaacggctttgaccgcattggcttt
ttgggcgctagaatggacccgcgtgcgcaacagcgtatgttggggtacaagcaggctatg
gataccgctggtagaaattacgatggccttattgtaaccacgcctaagccttcttctatt
gcgatggggggcgagttactgcgcagtgttatgtctagcagcaacggtgtgtgtgatgcg
ctatttgcctgtaacgacgacttggcgttgggggctttgtttgagtgccagcgtatgaat
ataagcgtaccgggtgatatggctatttgcggctttaacgatattgaaaccgcggcatta
gtcaatccatctttatcgagcgtgcatgtgccgcgctacgaaatgggcgtaaccgcaacc
gaaatggtgctaaaggtgttggcgggtaacgaagttgaaaacaaaaaaatcgacattggc
tacaccattcaaatgcgccaatccaccagcaccgatattcattggtag
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