| Entry |
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| Symbol |
pel1C
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| Name |
(GenBank) putative pectin/pectate lyase
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| KO |
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| Organism |
sde Saccharophagus degradans
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| Pathway |
| sde00040 | Pentose and glucuronate interconversions |
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| Brite |
KEGG Orthology (KO) [BR:sde00001]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Sde_0942 (pel1C)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sde_0942 (pel1C)
Enzymes [BR:sde01000]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Sde_0942 (pel1C)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1217531..1219840
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| AA seq |
769 aa
MRNTKHLLNSGAVLLASSIATAAMAGPVGFASLNGGTTGGQGGQVVYANTGTQINEAMCN
RPSHDTPLIIYVSGTINHGNTEKVSGNCDTTGDEIQFKKVKNLSLIGTGNGAVFDQIGIH
LRETSNIILQNLHIKNVKKSGSPTSNGGDAIGMESGVYNVWVDHCELEASGGEKDGYDSL
LDMKATTQYVTVSYTYYHDSGRGGLMGSSDSDDTNTYVTFHHNYYKNMDSRLPLLRHGTA
HAFNNYYDGITKSGMNPRIGGQIKAENNYFENAHNPIGTFYTNDMGYWDLSGNIFGNNVT
WASADDETPAGPNPQSTTSIHISYPYSLDDATCVPKIVKATAGVGNGLAVSTGGSNCGTS
SSSSSSSSSSSTSSTSSTSSSSSSSNSSSGGSGVNLSIGAGSDGSSKGAGSYGDVRDGNM
STYWAPSGSTGRVSIKWSSATTVSSIVIKEAAGFEGNITGWQVVNNENGAVLKSGSNAGV
ISFSPVSTTKLNFEITSSNGMPTVAEFETYSGTVGGTSSSSSSSSSSSSSSSSSSSTSSS
GGSANLGTSVSGDQVSLNWSTSNIDVGSQQVYRDTDSNPSGRVRISAGVSGNSYTDYGLA
SGTYYYWIKITDQNGVVYNTNAAEAVVGSQAPTTFTAQESAGFCSVNGSVDSNNAGYTGD
GFVNTDNASGNAAVYAFNAPSAGMYSLQVRYANGSSARPGDVLVNAGNIGTFDFSSTGSW
TSWANSNELSAYFSAGNNTVRIQATNSGGLPNLDSVSVTGNAPAAGNCN |
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| NT seq |
2310 nt +upstreamnt +downstreamnt
atgagaaacactaaacacctactcaatagcggtgccgtattgctagctagcagtattgca
acagctgcgatggcggggcctgtgggctttgcatcgcttaatggtggcacaacgggcggt
caaggcggtcaagttgtatacgccaacaccggtacacaaattaacgaagccatgtgtaac
cgcccatctcacgatacgccgttaattatttatgtatccggtaccattaaccacggcaac
accgaaaaggtgtcgggtaattgcgatacaaccggcgacgagattcagtttaaaaaagtt
aaaaacctatcgttaattggtactggtaacggtgcggtgtttgatcaaataggtattcat
ttacgcgaaacctccaatattattctgcaaaaccttcatattaaaaatgttaaaaaatcg
ggttctccaacctccaatggcggcgatgcaattggaatggagtctggcgtatacaatgtg
tgggtggatcactgtgagctagaagcatccggtggtgaaaaagatggttacgattcattg
ctagatatgaaagcaaccacgcagtatgtaaccgtttcttacacctattaccacgattca
ggccgcggtggtttaatggggtcgagcgatagtgacgataccaacacctacgtgactttc
caccacaattactacaaaaatatggattcacgcttaccgcttttacgccacggtactgcg
catgcctttaacaactattacgatggcattaccaaatctggtatgaacccccgtataggc
ggtcaaataaaagcagaaaataactatttcgaaaacgcacacaacccaataggtacgttt
tacacaaacgatatgggttactgggacttaagcggcaatatatttggcaacaacgtaacg
tgggcgtctgcggatgatgaaacccctgcagggccgaatccacaatccacaacgtccatt
catatttcttacccctacagcttggatgacgcaacgtgcgtgccgaagattgtaaaagct
actgcgggtgtgggtaacggtttggctgtgtctaccggtggtagcaattgcggtacttct
agctcttcgtctagcagctcttcgtccagctctacctcgtctaccagttctacatctagc
agttcttcatcatccaatagttcttctggtggctcaggtgtaaacctttcaattggcgca
ggttctgatggtagcagtaaaggtgcgggctcttatggcgatgtgcgcgatggcaatatg
agcacctactgggcaccgagtggcagcactggtcgcgtatctattaagtggagttcggca
acgacggtaagtagcattgttattaaagaagcggctggctttgaaggtaacattactggc
tggcaagttgtaaacaacgagaatggcgcagtattaaaaagcggctctaacgctggcgta
atttctttttctccggtttctactacgaagttaaatttcgaaattacctcttcgaacggc
atgcccacggttgcagaatttgaaacctatagcggcacggttggtggtacttcgtcatcc
agttcttcaagtagttcgtcaagcagttcttcaagcagctcaagttcaacgagcagctct
ggtggttccgcgaatctaggtacctcggtaagtggcgatcaggtttcacttaattggtct
acctcaaacattgatgtgggttcgcagcaagtttatcgcgataccgattcaaacccatct
ggtcgtgtgcgtatctctgcaggcgtttctggtaattcgtataccgattacggcttagct
agcggtacttattactactggataaaaattaccgatcaaaacggtgttgtttacaacaca
aatgccgcagaagcggttgtaggcagccaagcgccaacgacgtttactgcgcaagagtct
gcgggtttctgctctgttaacggttctgttgattccaataacgctggctacactggcgat
ggttttgtaaataccgataacgccagtggcaatgcagcagtttatgccttcaatgcacct
agtgcgggtatgtatagcttgcaggttcgctacgcaaacggttctagtgcacgcccaggt
gatgtgctggtcaacgctggcaatattggaacatttgatttttccagtaccggttcttgg
acatcttgggcaaacagtaatgagttaagtgcgtacttctctgcgggtaacaatactgtt
cgtattcaagctactaactctggcggcttacctaacttagatagtgtttctgtaacgggt
aatgcaccagcggcaggcaactgtaattaa |
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