Saccharophagus degradans: Sde_1080
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Entry
Sde_1080 CDS
T00335
Name
(GenBank) conserved hypothetical protein
KO
K23127
cyclic-di-GMP-binding protein
Organism
sde
Saccharophagus degradans
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FimW_N
FimW_M
FimW_C
Motif
Other DBs
NCBI-ProteinID:
ABD80342
UniProt:
Q21LT7
LinkDB
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Position
complement(1381867..1383612)
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AA seq
581 aa
AA seq
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MKRFEFMAEEQNPIELLAQMALPVQDLSRLTFCNSNKPAKLAEWASDLKATQISHTSVVL
YKALPELSKLKCNYSVRMEMLELLRPRVQHCITGLTREFLNQPVVLPETAQKTAIVAQAL
QKQMLDGYLVCLADCIKSGRLKQQTYTDLSQILHRAITAISLIFYRGFQLYTQPPQGLWK
SLHALYQISEYYELNEKSVVDALLETSRTTTISAAYIRTLLLAASRPNQLNQHDVTHLNA
ALETWSELVKLNKGITSNKNNLFIVNLSAGTPPTYKNRFDGKQSDLLLEIDMGALLGMLA
KISTGESTPQSSGIRVAADFPAALLQHALDAWGHVAQRGQERRPVQATAEICAGLTDCHQ
AIAGGMSFNDFTGSINLSNPLNDREYGDFHSSVTPNGERSKAAAMPANKVSIVNASPGGY
CLLWKDKMPSNIQAGEIIAIKELGRLHWSVAVIRWVKQLKQASQLGIKIISQHPKASAIA
QVYDMGGHSDYMRAIHVSQKADGRTQPTLITATAPFGEGGKAKLLNGEQTLSIKLGKCLF
STSNIKQFAFTQLEQMQDEEPRSRPVTPPSKQSFDSSWDDD
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtttcgaattcatggcggaagaacagaatccaattgagctactcgcacaaatg
gcattgccagtgcaggatctgtctcgcctaactttttgtaatagcaataagcccgctaag
cttgccgaatgggcaagcgacctaaaagccacgcaaatatcccataccagtgttgttctg
tacaaagccctacccgagctaagcaaattaaaatgcaactacagtgttcgcatggaaatg
ctagagcttttgcggccgcgggtgcagcattgcatcacggggctaactagagagtttttg
aatcaaccggtagtactgcctgaaacggcacaaaaaacagccattgtcgctcaggcacta
cagaaacaaatgctcgacggctacttagtatgcctagctgactgtattaaaagcggcagg
ctcaagcagcaaacctacactgacctgtcgcaaatattacaccgcgctatcacggcaatt
agccttattttctatcgcggttttcaactgtatacccaaccgccacagggcctatggaaa
tcactacacgcgctataccaaattagtgagtactacgaattaaatgagaagtcggtggtt
gatgccttactagaaacctcacgcacaacgacaattagcgcagcctatattcgcacactg
ctgctagctgccagccggcctaatcagctaaaccagcacgacgttacacatttaaacgct
gcactcgaaacgtggagcgaattagtaaagctaaacaaaggcattaccagcaacaaaaac
aatctgtttatagtgaatttatctgctggcaccccacccacttacaaaaatagattcgac
ggcaaacaaagcgatttattacttgaaatagatatgggcgccctgctgggcatgcttgcc
aagatatccaccggcgaaagtacacctcagtcgagcggcatacgtgttgctgccgacttc
ccagcagcgcttctgcagcacgctttagatgcttgggggcatgtggcgcagcgggggcag
gagcgtcgcccggttcaagcgacagcagaaatatgtgcaggcctcaccgattgccatcaa
gctattgccggcggcatgtcgtttaatgactttactggatctatcaatctgtctaacccg
ttaaatgatcgcgagtacggcgattttcacagctcggtaacacccaatggcgagcgcagc
aaagcagctgcaatgcccgccaacaaagtaagcatagtgaatgccagcccagggggctac
tgtttactttggaaggacaaaatgccttccaatattcaggcgggcgaaataatcgcaatc
aaagagcttggtcgcctgcactggagcgttgctgttattcgctgggtgaagcaattaaaa
caagcatcgcaactgggtattaagattattagtcagcacccaaaggcgagtgcaattgcg
caggtttacgatatgggtggccattcagattacatgcgcgccattcacgtgagccaaaaa
gcagatggccgcacgcagcccacacttattaccgcaacagcgccgtttggtgagggtggg
aaagcaaaattattgaatggagagcaaacactctctattaaactgggcaaatgcttgttt
tccaccagcaatatcaaacagtttgcttttacacagttagaacaaatgcaagatgaagaa
ccacgttcaaggcccgtcacaccacctagcaagcaatctttcgattcttcttgggatgac
gattaa
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integrated database retrieval system
