Saccharophagus degradans: Sde_1175
Help
Entry
Sde_1175 CDS
T00335
Symbol
aga16B
Name
(GenBank) b-agarase
KO
K01219
beta-agarase [EC:
3.2.1.81
]
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
Sde_1175 (aga16B)
Enzymes [BR:
sde01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.81 beta-agarase
Sde_1175 (aga16B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_6
CBM_35_2
BclA_C
Motif
Other DBs
NCBI-ProteinID:
ABD80437
UniProt:
Q21LJ2
LinkDB
All DBs
Position
complement(1511685..1513481)
Genome browser
AA seq
598 aa
AA seq
DB search
MKTTKCALAALFFSTPLMAADWDGIPVPADPGNGNTWELQSLSDDFNYAAPANGKSTTFY
SRWSEGFINAWLGPGQTEFYGPNASVEGGHLIIKATRKPGTTQIYTGAIHSNESFTYPLY
LEARTKITNLTLANAFWLLSSDSTEEIDVLESYGSDRATETWFDERLHLSHHVFIRQPFQ
DYQPKDAGSWYPNPDGGTWRDQFFRIGVYWIDPWTLEYYVNGELVRTVSGPEMIDPYGYT
NGTGLSKPMQVIFDAEHQPWRDEQGTAPPTDAELADSSRNQFLIDWVRFYKPVASNNGGG
DPGNGGTPGNGGSGDTVVVEMANFSATGKEGSAVAGDTFTGFNPSGANNINYNTLGDWAD
YTVNFPAAGNYTVNLIAASPVTSGLGADILVDSSYAGTIPVSSTGAWEIYNTFSLPSSIY
IASAGNHTIRVQSSGGSAWQWNGDELRFTQTDADTGTNPPSTASIAVEAENFNAVGGTFS
DGQAQPVSVYTVNGNTAINYVNQGDYADYTIAVAQAGNYTISYQAGSGVTGGSIEFLVNE
NGSWASKTVTAVPNQGWDNFQPLNGGSVYLSAGTHQVRLHGAGSNNWQWNLDKFTLSN
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccaccaaatgcgccctagctgcgctcttcttcagtacccctcttatggctgca
gattgggacggaattcctgtcccagcggacccagggaatggcaacacctgggagctacag
tccctttctgacgatttcaactatgcggccccagctaacggcaaaagcaccaccttctat
agccgctggagcgaaggctttatcaatgcttggctcggcccggggcaaaccgagttttac
ggccccaatgcttcggtagaaggcggccaccttattattaaggccactcgcaagccaggt
actactcaaatttacactggagcaattcactccaatgaaagttttacctacccattgtat
ttggaagcgcgcaccaaaattacaaacctcaccctcgccaacgcattttggctactaagc
tcagattccaccgaagagattgatgtgctggagtcttacggcagcgaccgtgcaacagaa
acgtggtttgacgaacgcctacacttaagccatcacgtttttatccgccagccatttcaa
gactaccaaccgaaagatgcaggcagctggtaccccaaccccgatggcggcacttggcgc
gaccaatttttccgtataggtgtttattggatagacccatggacactggagtattacgtg
aatggcgaattagtgcgcactgtaagcggcccagaaatgattgacccgtacggttacacc
aacggcacaggcctaagtaaacccatgcaagttattttcgatgcagagcatcagccttgg
cgcgacgaacaaggtactgccccacccaccgacgcagagctagccgactcgagtcgcaat
caattcttaattgactgggtgcgattctacaaacccgtggcaagcaacaatggtggcggc
gacccaggcaatggcggcaccccaggtaatggtggcagtggcgatactgtagtggtagaa
atggccaacttctctgccacaggtaaagaaggctctgcagttgcaggcgacactttcaca
ggcttcaaccccagcggcgcgaacaacatcaactacaacaccttaggggattgggcagac
tacacggtgaacttccccgctgccggtaattacaccgtaaacctaattgcagcctcgccg
gttacatctgggctgggtgcagatattttggtagacagcagttacgcaggcaccatacct
gttagcagcaccggagcttgggagatatacaacacctttagcttgcccagctcgatttat
atcgcaagcgcaggcaatcatactattcgcgtacaaagctccggcggtagcgcttggcag
tggaacggcgacgaacttcgctttacccaaacggatgcggatacaggcaccaatccaccc
agtacagccagcatagcggttgaagccgaaaactttaacgcggtgggcggcacctttagc
gatggtcaagctcaacctgttagcgtttacaccgttaacggcaacactgccattaactac
gtaaaccaaggcgattatgccgactacaccattgctgttgcccaagcgggtaactacacc
attagctatcaagctggcagtggcgtaacaggtggtagcatagagtttttggttaacgaa
aacggaagctgggccagtaaaaccgttaccgccgtaccaaaccaaggttgggataacttc
caacccttaaacggaggcagcgtttacctaagcgcaggcacccaccaagttcgtttacac
ggcgctggcagcaacaactggcagtggaacctagataagttcacgcttagcaactaa
DBGET
integrated database retrieval system
