Saccharophagus degradans: Sde_1218
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Entry
Sde_1218 CDS
T00335
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sde
Saccharophagus degradans
Pathway
sde03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Sde_1218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sde03400
]
Sde_1218
Enzymes [BR:
sde01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Sde_1218
DNA repair and recombination proteins [BR:
sde03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Sde_1218
Prokaryotic type
Sde_1218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABD80480
UniProt:
Q21LE9
LinkDB
All DBs
Position
1565787..1566443
Genome browser
AA seq
218 aa
AA seq
DB search
MQQIGQEFEQPYMAELKAFLLREKKAGKTIYPAGENIFNALNTTPFEHVKVVILGQDPYH
GPGQAHGLCFSVLPGVRFPPSLLNIFKEIHNDLGFDIPSHGCLQSWAEQGVLLLNATLTV
EQAKAGSHQGKGWETFTDAVIGALNNHREGIVFLLWGSYAHKKGNIIDTTRHHVLKSVHP
SPLSAHRGFFGNSHFSQANKFLAQQGLTEIDWRVPPSE
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaaatagggcaagagtttgagcagccctacatggcagagttaaaagcatttttg
cttcgcgaaaaaaaagcaggtaaaactatttaccccgcaggcgaaaacatttttaacgca
ctaaataccacgccttttgagcacgtaaaagtagtaattctcgggcaagacccgtaccac
ggccctggccaagcccacgggctgtgtttttctgtattgccaggcgtgcgctttccgccg
tcgcttctgaatattttcaaagaaattcacaacgatttggggtttgatattccaagccac
ggttgtttgcagtcctgggctgagcagggggtgttactgttaaatgccaccttgactgtc
gagcaggccaaagctgggtcgcatcagggtaaggggtgggaaacttttaccgacgcagtt
ataggggctttgaataatcatcgcgaaggtatcgtttttttattgtggggtagctatgca
cataaaaaaggtaacattatcgataccacacggcaccatgtacttaaatctgtgcaccca
tcaccgctttctgcgcaccgtggtttttttggtaatagccacttttcgcaagcgaataaa
tttttagcacagcaaggtctcaccgaaatagattggcgtgtgcccccaagtgagtaa
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