Saccharophagus degradans: Sde_1237
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Entry
Sde_1237 CDS
T00335
Name
(GenBank) transcriptional regulator, GntR family
KO
K04075
tRNA(Ile)-lysidine synthase [EC:
6.3.4.19
]
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sde03016
]
Sde_1237
Enzymes [BR:
sde01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.19 tRNAIle-lysidine synthase
Sde_1237
Transfer RNA biogenesis [BR:
sde03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Sde_1237
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP_bind_3
TilS_C
TilS
PAPS_reduct
QueC
tRNA_Me_trans
LpxB
Motif
Other DBs
NCBI-ProteinID:
ABD80499
UniProt:
Q21LD0
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All DBs
Position
1586968..1588257
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AA seq
429 aa
AA seq
DB search
MNEIEREISAQITALSPQACVWVAFSGGLDSTVLLHALSVLGVKCHAVHVNHGLSINADN
WQRQCSVFASQREIAFTAVKVIVSAEGRGIEEAARVARYNAIENLLAPSDVLLTGHHRDD
QIETFFLRLMRGAGLRGLGAMRRTRSLSQAILVRPLLNISRQSLHEYALQQGLTWIEDES
NLDTHYDRNLLRQTFVPQLKARWPQVEKNVETTVQHLQAAEDLLQEYAAADLALCESRQE
RLGCSIALNPMRAFSTERTSHILRSWLASLGYKLPDTARMVELHKIIAAKDDAAPLLNIG
DYSLCRFQQRLYCLPRTAIETDCAPHTWNPIEPLHAADGSELRFTAASDNMPVFEVAYRQ
GGERCKPVGRGHSQTLKKLLQEYGLEPWLRAKVPLIYYQGNLIAVGDLWLCETETGKGVE
GHFEWGYFE
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaatagaacgcgaaatttctgcccaaataactgcgctttcgccgcaagcgtgc
gtgtgggtggcgttcagtggtggactcgattctaccgtgctgctgcatgccctatctgtt
ttgggggttaaatgccatgcggtacatgttaatcatggcttatctattaatgcagataat
tggcagcgccagtgcagtgtgtttgcatcgcagcgcgaaattgctttcacggcggttaaa
gtgattgtatcggctgaaggtcgcggtatagaagaggcggcgcgtgtagcgcgctataac
gcgatagagaatttactcgcacccagcgatgtattgcttacggggcatcaccgcgacgat
caaatagaaacgttttttttgcgtttaatgcgcggggctggtttgcgcggcttgggggca
atgcggcgcacacgctcgctcagtcaggcaatacttgtacggccactgctaaatattagt
cggcaatcattgcacgaatatgccctgcaacaggggttaacttggatagaagacgagagt
aacttagatacgcattacgacagaaacctattgcgtcaaacctttgtaccgcaacttaag
gcgcgttggccgcaagttgaaaaaaacgtagaaactactgtgcaacacttacaggcagca
gaagatttattgcaagaatatgccgccgctgatctagcactctgcgaaagcaggcaagag
cgactaggctgcagtattgcgttaaacccgatgcgggcgttctcgacagagcgtaccagc
catattttacgcagctggcttgcaagcttaggttacaaattaccagacactgcgcgcatg
gttgagctgcataaaataatcgctgcaaaagacgatgcagcaccgctattgaatattggt
gattacagcttgtgtcgttttcagcaacggctgtactgtttgccgcgcactgcaatcgaa
acggattgcgcgccacatacttggaaccctattgagccactgcatgccgcagatggtagt
gagctgcggtttactgctgcaagcgacaacatgccggtttttgaggtggcttaccgtcaa
gggggggagcgctgcaagcccgtggggcgagggcattcgcaaaccctcaaaaaactattg
caggaatacggtctggaaccctggcttagggctaaggtgccgcttatttactatcaaggt
aaccttattgccgtgggggacttgtggttgtgcgaaaccgaaacaggtaagggggtagaa
gggcattttgaatggggctattttgaatga
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