Saccharophagus degradans: Sde_1244
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Entry
Sde_1244 CDS
T00335
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
sde
Saccharophagus degradans
Pathway
sde00541
Biosynthesis of various nucleotide sugars
sde01100
Metabolic pathways
sde01250
Biosynthesis of nucleotide sugars
Module
sde_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Sde_1244
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sde01005
]
Sde_1244
Enzymes [BR:
sde01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
Sde_1244
Lipopolysaccharide biosynthesis proteins [BR:
sde01005
]
Lipid A
Sde_1244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
ABD80506
UniProt:
Q21LC3
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All DBs
Position
1595283..1596134
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AA seq
283 aa
AA seq
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MQDKIIKVGNIDVANNKPFTLFGGMNVLESKDLALRTAEAYVNVTQKLGIPYVFKASFDK
ANRSSINSYRGPGMEEGLRIFQAVKDEFGVPIITDVHECDQAAPVAEVVDVIQLPAFLAR
QTDLVKAMAATNAVINVKKPQFLSPGQMKNIVEKFAESGNEKVILCERGACMGYDNLVVD
MLGFRTMKEVSGGLPVIFDVTHSLQCRDPLGAASGGRRHQTAELGRAGIAVGIAGLFLEA
HPNPAEAKCDGPSALPLEQLEAFLTQMKTVDDVIKGLPPLDIR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataaaattattaaagtaggcaacatagacgttgctaacaataagccgtttaca
ctctttggcggtatgaacgtattagagtcgaaagacttggcattgcgcaccgcagaggct
tacgtaaacgttacccaaaagttgggtattccctacgtatttaaagcgtctttcgataag
gccaaccgctcttctattaacagctatcgcggcccagggatggaagagggcttgcgaatt
tttcaagcggttaaagatgagtttggtgtacctattattaccgatgtgcacgaatgtgat
caggctgccccggttgccgaagtggtagatgttatacaactgcctgcattcttagcgcgt
caaacagatttagtaaaagccatggcggcaacaaatgcggtaattaatgtaaaaaaacca
cagtttttaagccctggtcaaatgaaaaacatagtagaaaaatttgcggaaagcggtaac
gagaaagttattttatgtgagcgcggcgcatgcatgggctacgacaaccttgttgtagat
atgctgggctttcgcacaatgaaagaagtaagcggcggtttgccggttatttttgacgtg
actcactcgttacagtgccgcgatcctttaggtgcagcttcaggtgggcgccgccatcaa
accgcagagctaggtcgtgcaggtatagctgtaggcatagctggtttgtttttagaggct
caccccaacccagcagaggccaaatgcgatggcccaagtgcgttgccgctagagcaactc
gaagcatttttaacacaaatgaaaacagtggatgatgtaattaaaggcttacccccttta
gacattcgctag
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