Saccharophagus degradans: Sde_1263
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Entry
Sde_1263 CDS
T00335
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sde02000
]
Sde_1263
Transporters [BR:
sde02000
]
Other transporters
Pores ion channels [TC:
1
]
Sde_1263
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ABD80525
UniProt:
Q21LA4
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All DBs
Position
complement(1616296..1619058)
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AA seq
920 aa
AA seq
DB search
MATFQDRFKLKIISAAIIAASSFGAQAQTNTGSLEEVVVTGIRASLTGAMDVKREASGVV
DAISAEDIGKFPDTNLAESLQRITGVAIDRSNNEGNQVTVRGFGPSFNLVTLNGRQMPNS
SALASTPISRSFNFREIAAESVSAVEVHKTGKAHMFTGGLGATINLKTSKPFELDEFTAH
ASVKGVFEPSVENGDNITPELSGMISKTFADNKFGVLASFSHADRNFHVDRIGTQNGWSQ
GYPGQASPDTSAINTDKNPTLATWRVPTVDLDNADYERTRQNGQLVLQFAPNDELTATVD
YTMSRLEENGDLNRMSFWFDNVETGRADENGTIINPARSNDELNFWAWEYGFTTENDSFG
LNIDWAVNDELVLTLDTHSSTSHSNPGGQPAERIANLKNPFGDAAPVHIAADFSNKLPTV
SYDDSALPGGAYALDNIEGDLYQERGNEVKNNIQQTQLHGVWQNQEDGALTAINFGLAWT
QNKVDAISIYSANFSLGNGAIDLTGLDLSFTPGDIGFEYAPVFSANQFIDLVEQQDLKNP
TALDKNGVKEDVNALYVSLDFETEFNNMPIRANVGLRYEDTEVSSYTIGNPVIGFNWVSP
LELSKIYASEEAADTLTGEYNHLLPNFDFSVDVIEDLVARVSYSKTIARSNIDAMYPGTD
MHTHLSGGPFKANQGNPDLLPFESENFDFSVEWYYSEGSYLSGGFFRKKVDNFIALGETQ
RAINSPQGVLTDPSANPRAGCPAGSVADPVPACTSQPSDPAITWQIAEPQNLNDSLVDGW
EFNIQHMFAETGFGVIANYTMVNSDDRYDVYSLENDLALQGLSDTANLIGFYENDDFQIR
VTYNWRDKFLLASGVEPTFTAAYSQVDLNASYNINESVSVFVEGINLTDEATHRYGRWEN
QLVDYQQFGQRYNLGIRTKF
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctttcaagatcgatttaaattaaaaattatttcagccgcaattattgccgcg
tccagctttggcgcacaagcacaaacaaacacgggttcactagaagaagtcgttgtaacc
ggtattcgcgcctcgctaacaggtgctatggatgttaagcgcgaagctagtggcgtggtg
gatgcaattagcgcagaagacataggtaagtttcccgatactaacttggcggaatcgtta
caacgtattaccggtgttgccatcgaccgcagcaataacgaaggtaaccaagtaacagtg
cgcgggtttggccccagctttaacttggttacacttaatggtcgccaaatgccaaactct
tctgcattggcctctaccccaatatctcgcagctttaactttcgagaaattgctgcagaa
tcagtatctgcagtagaagtacataaaacaggtaaagcacatatgtttaccggcggattg
ggtgcaaccattaatttaaaaacatctaaaccctttgagctagatgaatttaccgcccac
gccagcgtaaaaggcgtatttgaaccaagcgtagaaaacggcgataacattacgcctgaa
ctttccggcatgataagcaaaaccttcgccgataataaattcggcgtactcgcgtctttt
tctcacgcagatcgtaattttcatgtagatcgcataggcactcaaaacggctggagccaa
ggctacccagggcaagcctcaccggatacctctgccattaacaccgacaaaaacccaacc
ttagccacatggcgcgtgccaacggttgacctcgacaacgccgattacgagcgcacacgt
caaaatggtcagttagtgctgcagttcgcccccaacgatgagcttaccgccacggtggat
tacaccatgtcgcggttagaagagaacggcgatttaaacagaatgagtttttggttcgat
aatgtagaaactggcagagccgacgagaacggcactatcatcaaccctgcccgctccaac
gacgaactcaatttttgggcttgggaatacggctttacaacagagaacgattcgtttggc
ctaaatatagattgggcggtaaacgacgagctagtacttactttagatacacacagctcc
acttcgcactctaaccccggcggccaacctgccgaacgtatagccaacctaaaaaaccca
tttggcgatgcagccccagtgcatattgctgctgacttttctaacaagttgccaacagtt
tcttacgacgactccgctctgcccggcggcgcttacgcgctagacaatattgaaggcgac
ctatatcaagaacgcggcaacgaagttaaaaacaatattcaacaaacacagcttcacggt
gtttggcaaaaccaagaggacggcgccttaacagccatcaactttggtttggcatggacc
caaaataaagtggatgccataagcatttatagcgcaaacttttcgctaggtaacggcgcc
atagatttaactggcttagacctctcattcacccctggtgacataggctttgaatatgcc
cccgtatttagcgcaaaccaatttatagatttagtcgaacagcaggatttaaaaaaccca
accgcgctcgacaaaaatggggttaaagaagatgtaaatgcactgtacgtttcgttagat
ttcgaaacagaatttaacaacatgccaataagagcaaatgtgggcttacgctacgaagat
acagaagtaagctcatacaccattggcaaccctgtaattgggtttaattgggtttcgccg
ttagagctttctaaaatttatgcttctgaggaagccgcagatacgcttaccggtgaatac
aaccatctactgcctaacttcgattttagtgtagatgtaattgaagatcttgttgcgcga
gtttcctacagcaaaacaattgcgcgcagcaatatagatgcaatgtacccaggcacagat
atgcacacccacttatcgggcggcccttttaaagccaaccaaggtaacccagacttactg
ccgttcgaatcagaaaatttcgacttttctgtagaatggtactacagcgaaggcagttat
ttatctggcggtttcttccgcaaaaaagtagataactttatcgctttaggtgaaacgcag
cgcgcaattaacagccctcaaggcgtactaaccgaccctagcgcaaaccctcgcgcaggc
tgcccagcggggtcagttgcagacccggtaccggcttgtacatcacaacccagcgaccct
gcaataacatggcaaatagctgagccgcaaaaccttaacgactctttagtagacgggtgg
gaatttaatattcaacacatgtttgcagaaacaggttttggggtaattgcaaactacacc
atggtaaacagcgacgatcgctacgatgtttacagtctagaaaacgatctagcgctacaa
ggccttagcgataccgctaaccttattggcttttacgaaaacgacgactttcaaatacgt
gttacttacaactggcgcgacaaatttttacttgcctcaggtgtagagccaacattcacc
gcggcctattcgcaagtagatttgaatgctagctacaacataaacgaaagtgtatcggta
tttgtagaaggtattaacttaaccgatgaggcaactcaccgctacggccgctgggaaaat
caactcgtggactatcaacaatttggccaacgttacaacctaggtatacgcaccaaattt
tag
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