Saccharophagus degradans: Sde_1438
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Entry
Sde_1438 CDS
T00335
Name
(GenBank) Small GTP-binding protein domain
KO
K03977
GTPase
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sde03009
]
Sde_1438
Ribosome biogenesis [BR:
sde03009
]
Prokaryotic type
GTPases
Sde_1438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
RsgA_GTPase
AIG1
Ras
Roc
AAA_22
TniB
ABC_tran
NTPase_1
AAA_24
cobW
ATP-synt_ab
G-alpha
Motif
Other DBs
NCBI-ProteinID:
ABD80700
UniProt:
Q21KS9
LinkDB
All DBs
Position
1857099..1858514
Genome browser
AA seq
471 aa
AA seq
DB search
MIPTLALVGRPNVGKSTLFNRLTRSRDAIVANFSGLTRDRQYGEATHGDKRFIVVDTGGI
SGEEEGIDSYMAGQSLQAIEEADMVAFIVDARVGLTAADMQIAQHLRTCNKPIFLLANKV
DGVNESIVCAPFFELGLGDVIGIAAAHGRNINTMLDTVLENVEPEAEASEEDKAKGIKLA
IVGRPNVGKSTLVNRMLGEDRVVVYDMPGTTRDSIYIEYERDGKAYTIIDTAGVRRRKNI
KLSVEKFSIVKTLQAIDDANVVILVMDAQEGIVDQDLHLMGHVIDSGRALVVALNKWDNL
DNDHKSYVKTELSRRLQFVDFADLHFISALHGTGVGDLYKSVHKAYSSATEKLNTNFLTK
ILEFAVSQHQPPLVNGRRIKLRYAHAGGQNPPIIVIHGNQTAAVPKNYVRYLEKIFRKEL
ELHGTPIRFEFKSSENPFAGRKNAMSKKPEHPSRRANSGGKSINRRPRPKS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgatcccaaccttggccttagttggccgccccaatgtgggcaaatcaaccctttttaac
cgtctaacacgttcgcgcgatgcgattgtggctaacttttccggtcttacacgcgatcgc
caatacggtgaagcaacccatggcgacaaacgttttatcgttgtcgataccggcggtatt
agtggtgaagaggaggggatagattcctatatggctggccagtcgctgcaagccatcgaa
gaagccgacatggtggcatttatagtggatgcccgcgtaggcttaaccgcggccgatatg
caaatcgctcaacacctgcgtacctgcaataagcctattttcttgctagccaacaaagtt
gatggtgttaacgaatccattgtgtgcgcgccattttttgagctgggtttaggcgatgta
attggtattgctgcggcccatgggcgcaacataaacaccatgctcgacacggtattagaa
aacgtcgagccagaagccgaggcttcagaagaggataaagccaagggtattaagcttgca
attgttggtcgccccaatgtgggtaaatccaccttggtgaatcgcatgctcggcgaagat
cgtgtagtggtttacgatatgcccggcactacgcgagatagtatttacatcgaatatgag
cgcgatggaaaagcttataccatcatcgacacggcgggtgttcgacgcagaaaaaacatt
aagttaagtgtagagaaattctccattgtaaaaacgctacaagcgattgacgacgccaac
gttgttattttagtgatggatgcgcaagaggggattgtagatcaagaccttcacctaatg
gggcacgttatcgattctggccgcgcgctagtggttgcgcttaataaatgggataacctc
gataacgaccacaaaagttatgtgaaaactgagcttagtcgtcgtttgcagtttgtagac
ttcgcggatttacattttatttctgcgttgcacggtactggagtaggtgacctgtacaag
tctgttcacaaggcttattcatcagctaccgaaaaactaaatacaaatttcttaactaaa
attttggaatttgctgttagccaacatcaaccgccgttggttaatgggcgtcgtattaag
ttgcgttatgcccatgccggtggtcaaaacccgcccattattgttattcacggtaatcaa
acggcagctgtgcctaaaaactatgtgcgttacttagaaaagatattccgtaaagagtta
gagctacacggcacgccaattcgatttgaatttaaatctagcgaaaacccatttgccggg
cgcaagaatgcaatgtctaaaaagccagagcaccctagccgccgagcaaatagcggtggc
aagagtattaatcgcaggcccagacctaaaagctag
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