Saccharophagus degradans: Sde_1441
Help
Entry
Sde_1441 CDS
T00335
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sde02000
]
Sde_1441
Transporters [BR:
sde02000
]
Other transporters
Pores ion channels [TC:
1
]
Sde_1441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ABD80703
UniProt:
Q21KS6
LinkDB
All DBs
Position
1860778..1863303
Genome browser
AA seq
841 aa
AA seq
DB search
MKIIRFFLIVCMVHTCLPPAALASTNIMGANSQRYFDLPGQPLQTGLIEFALQANVTVIA
EQGLIAQYRSGPVVGPSTIDNALRLLLAEAPLQFEYIESAAAYVIRPVAVQQSVSAEPTE
IVIPSIDEILVVGSQYPFRYNTITNTQLHGAVPYFDSSRFLNVIPQSLIRDQQPQSLEDV
LKFASAITPGDGISDSNDDVYLRGFQRHAMYLDGFRLGDSSGVRLLPAGIERVEILKGPS
TIHYGQAEPGGIVNVIRKKPKAETFSQAQLIAGDMGRLGVSVDVNRPLLNTNKANYRVIF
VDDQQQESGDILNIHRQLLSSSIAWQPSANTTVDVGFEYQKASQEWDRSFEVFTEFGNIF
PHRSMADVAKQARPGFTAHFNLFSAEVNHYFNPNWQLQLKANLLQEYRYGVRTTTDSYLD
DRVLLNTEGLGPDFALFILGSQTVLPLIVEQHDGLWHYGLGPIRSIYDQDDVELDSGFSA
KLEGSFDTANLEHNLSLGVDWHTQNITKRYIVERRDIALGQRWDAFEFEAAFAELAQTLF
IEDRPLGELEEYAKELDYSDFGAFVQDSVALTDEWLVSAGARYIVTQADVNDITLNTATQ
LKTFKHLSTQAGVVYKPNHDHSVFANYSEALRANYILDDIGSQITEPELSNQYEVGLKSY
WLGGDVQTSVAAYHINKWNVVDVQVVEGYRTALSGATYEVQGIDFDLSAQVSPKLNVLLA
ASVIDPSITDGSNTGNLPKMAAEQTSSVFTHYQLNSKLDFVAGYKFVSERYADDANTFRL
EAYGTFDAGVSYTFQLNGLHAKCNLSVKNLSDVPYITAVDRGARVNESAGRTISASFQVT
M
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataattcgcttctttcttatcgtctgcatggttcatacctgcctgccaccggct
gcgctagcaagtacaaatataatgggggcgaattcgcagcgttacttcgacttgcccggc
caacctttgcaaacgggtttaattgagtttgcgttgcaagcaaatgtaactgtaattgca
gagcagggcctaatagcgcagtaccgttctggccctgtggtagggcctagcactatagat
aacgcgttgcggctattactagcagaagcgccactccaatttgaatatatagaaagtgca
gctgcttacgttattcggcctgttgcggtgcagcaaagtgttagcgcagaaccgacagaa
atagtcattccaagtattgatgaaatactggttgtaggctcccaatatccgtttaggtat
aacaccattaccaatacccaattgcatggtgccgtgccgtatttcgattcttctcgtttt
ttgaatgtaataccgcaatcgcttattcgcgatcagcaaccgcaatccctagaagacgta
ttgaaatttgctagtgccattacccccggtgacggtattagcgatagtaatgacgatgtt
tatttacggggttttcagcgccacgcaatgtatttagatggctttaggctcggcgacagc
agtggcgttcgactactaccggcaggcatagagcgggtagagattttaaaaggcccgtcc
accattcattacggccaagcagagccgggtggcattgtgaatgttattcgcaaaaagccc
aaagcagaaacgttcagtcaggcgcaattgatcgctggggatatggggcggctaggggta
agtgttgatgtaaataggcccttgctcaataccaataaggcgaattaccgggtcattttt
gtagatgatcagcagcaggagtcgggtgatattcttaatattcaccgccagttgctgtct
agctcaatcgcttggcagccaagtgcaaataccactgttgatgtgggtttcgaatatcaa
aaggccagccaagagtgggatagaagctttgaagtatttactgagttcggcaatattttc
ccccatcgatcgatggcagatgtagccaaacaagcgcgcccaggttttacggctcacttc
aatttattcagcgctgaggtaaatcactactttaaccccaactggcagttacagctaaaa
gcaaatttgttacaggaatatcgctacggtgttcgcacaacaacagatagctatttagat
gatcgtgtgcttttaaacaccgaaggtctagggccagattttgcattgtttattctgggt
agccaaacggttttgccgcttattgtggagcaacacgatgggctttggcactatggttta
gggcccattcgaagtatttacgatcaagatgacgtagaattggatagcggttttagtgcg
aaattagagggtagttttgataccgctaacttagagcataacctttcgctaggagtagat
tggcacacgcaaaatattacaaagcgctatattgtagagcgcagagatattgcacttgga
cagcgttgggatgcatttgaatttgaagccgcctttgcagaacttgcgcaaacattattt
attgaagaccggccactgggcgagcttgaagaatatgcgaaagagttagattactcagac
tttggcgcatttgtacaagatagcgttgcacttaccgatgagtggttagtgtctgcaggt
gcgcgttacattgttacccaagcagatgtaaacgatataaccctgaatacagcgacgcag
ctaaaaacctttaagcacttatccacccaagctggcgtagtgtacaaacccaaccacgat
cactctgtttttgccaattacagtgaagcgctgcgtgcgaattatattttggatgatata
gggtcccaaatcaccgagccggaattatcgaaccaatatgaagtagggctaaagtcttat
tggttgggtggtgatgtgcaaacgagtgtcgctgcgtatcatattaataaatggaatgtt
gttgatgtgcaagttgtagaggggtaccgcacagcgttaagcggcgctacttacgaggtg
caaggcatagatttcgatttaagtgcgcaggttagcccaaagctaaatgtacttttggcg
gcatctgtaatcgacccaagtataacggatgggagcaacaccggaaatttacccaaaatg
gctgcagagcaaacttccagtgtgtttacgcactaccagcttaatagtaagctagatttt
gttgccggctataaattcgtaagtgaacgttatgccgatgatgccaatacctttagacta
gaagcctacggcacattcgatgccggtgttagttatacctttcagttaaatggcttgcat
gccaagtgtaacttgtctgttaaaaatttatctgatgtgccgtacatcactgccgtcgat
agaggggctcgcgtgaacgagtcggcaggtagaactatttccgccagttttcaggtaacg
atgtaa
DBGET
integrated database retrieval system
