Saccharophagus degradans: Sde_1558
Help
Entry
Sde_1558 CDS
T00335
Name
(GenBank) protein of unknown function RIO1
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
sde
Saccharophagus degradans
Pathway
sde03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Sde_1558
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sde01001
]
Sde_1558
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sde03009
]
Sde_1558
Enzymes [BR:
sde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
Sde_1558
Protein kinases [BR:
sde01001
]
Serine/threonine kinases: Other
RIO family [OT]
Sde_1558
Ribosome biogenesis [BR:
sde03009
]
Eukaryotic type
Pre-40S particles
Kinases
Sde_1558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
APH
YrbL-PhoP_reg
Pkinase
TCAD9
Peptidase_M32
Motif
Other DBs
NCBI-ProteinID:
ABD80820
UniProt:
Q21KF9
LinkDB
All DBs
Position
2002033..2002893
Genome browser
AA seq
286 aa
AA seq
DB search
MKTPKRIQPLIEDGIVDEVLSSLMSGKEASVYIVRCGDEIRCAKVYKDAAQRSFKKASQY
QEGRKVRNSRRARAIEKGSKFGKGQQEEEWQNAEVDALYRLARAGVRVPTPYGCFDGVLV
MELVTNDDGEVAPRLNDVAMSPEQAIEDHTVMMHYIKLMLCEGLVHGDLSEFNVLVDDYG
PVIIDLPQAVDASANNHAEWMLERDINKITQYYAQFAPELLDTRYAKEMWAIYEDGELTP
DTELTGEFEDDSEAADVDAVLSEIKAVLAEERERQERLNAEEEDGF
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaccaaaacgcatacaacccctaattgaagacggcattgtcgacgaagtatta
agctcgctaatgagcggtaaagaagcttccgtttacattgtgcggtgcggcgatgaaatt
cgttgcgcaaaagtatacaaagatgccgcccagcgcagttttaaaaaagcctctcaatac
caagaagggcgcaaggtacgtaacagtcgccgcgcaagagcaatagaaaagggctctaaa
tttggtaaaggccagcaagaagaagagtggcaaaacgcagaggtagatgcactgtatcgc
ttggcgcgagcgggtgtacgtgtgcccaccccctacggctgtttcgacggcgtgctggtg
atggagctagtcaccaacgatgatggcgaagttgccccacgcctaaacgacgtagccatg
tctcccgagcaggcaatagaagatcatacggtaatgatgcattacattaagctaatgctt
tgcgaaggcttagtgcacggggatttatctgaatttaatgttctggtagacgattacggc
ccagtgattatcgatttaccccaggctgttgatgcctcggcaaataaccatgctgagtgg
atgctagagcgcgatattaataaaattacccagtactacgcccagtttgcccccgagcta
ttagacacccgctacgccaaagaaatgtgggctatttatgaagatggcgaactcacaccc
gataccgagctaaccggtgaatttgaagacgatagcgaagcggccgatgtggatgctgtg
cttagcgaaattaaagccgtactggccgaagagcgcgagcgccaagagaggctgaacgcc
gaagaggaagacggcttttag
DBGET
integrated database retrieval system
