Saccharophagus degradans: Sde_1582
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Entry
Sde_1582 CDS
T00335
Name
(GenBank) phenylalanyl-tRNA synthetase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
sde
Saccharophagus degradans
Pathway
sde00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sde_1582
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sde01007
]
Sde_1582
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sde03016
]
Sde_1582
Enzymes [BR:
sde01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Sde_1582
Amino acid related enzymes [BR:
sde01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Sde_1582
Transfer RNA biogenesis [BR:
sde03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Sde_1582
Prokaryotic type
Sde_1582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
ABD80844
UniProt:
Q21KD5
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All DBs
Position
2031764..2034214
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AA seq
816 aa
AA seq
DB search
MPALNHDNSIKSKDMKFSESWLREWVNPNASTQQIVDQLTMAGLEVDAVEPVAGTFNGVI
VGEIIDAQQHPDADKLRVCTVAGLPEGETQVVCGAPNARVGLKIPFATVGASLPPGEDGK
PFKIKKAKLRGVESFGMLCGQTELQAGDDDEGLWELPADAPVGQDLREYLSLNDNLIEVD
LTPNRSDCLSIKGLARELGVLSKIEVKAPVIAAVEPQISDVLSVALSAGSACSRYVGRVI
KGIDVAKPSPLWLQEKLRRSGIRSIDAVVDVTNYVLIELGQPMHAFDLAKINGGINVRLA
NAKEELTLLNDQKVELKEDTLVIADESGALAMAGIMGGEASAVTSATQDIFLESAFFEPI
AIAGRARSYGLHTDSSHRFERGVDYNGAQAAIERATALLLEIVGGQAGPVIVAESQQDLP
SVSNVNLSKARIESGLGFAIPDVEVEDILTRLGLKLVERNESGWTFAVPSYRFDVAIEAD
LLEELARIYGYNNLPTTTVRIPAQLPSKTETVTKLDRIKDHLASRGYREVITYSFVDPAL
QNLINGEQANVPIINPISSDMGIMRTSLLPGLLNTLSKNVKRQVQRVRIFESGLTFVAPE
GMDSQTLEGLTQPSMFAGLIYGARAPVGWHADKDDVDFYDIKGDLESLLAFTGQAVTFES
AEVKALHPGQTAKVKLAGTEIGYIGALHPEVAKQLDLPKAAYVFEVSLDAIKQAKVPAFT
ALSRYPEVARDIAILVDKGVNGAALEAEIRSVAGDYLKNLKIFDVYSGKGIDPQRKSIAF
NLIFQHPSRTLTEDEISAPMAEIVKKLEQSFNAQLR
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
ttgccagcactcaatcacgacaactctattaaaagtaaagacatgaagtttagcgaatcc
tggttaagagagtgggttaatcccaacgcaagtacacagcaaattgttgatcagttaaca
atggctggcttagaagttgatgctgtagagcccgttgcaggtacttttaatggcgttatc
gtgggcgagattatagatgcccagcagcacccagacgccgataaattgcgcgtgtgtaca
gtggccggtttgccagaaggcgaaacccaagttgtttgcggtgcgccaaacgcacgtgta
gggctaaaaattccgtttgctaccgtaggcgcgagcttaccgcccggggaagatggcaaa
ccgtttaaaattaaaaaagctaaattgcgcggtgtagagtcgtttggcatgttgtgcggt
caaaccgagctacaagctggtgacgatgacgaaggtttgtgggaattaccagcagatgca
cccgtaggccaagatttacgcgagtacctctcgctaaatgacaacttaattgaagtggat
ctcacgccaaaccgcagcgattgcttatctattaaaggcttggcgcgcgagcttggcgta
ttaagtaaaattgaagttaaagcacctgtcattgccgcagtcgagccgcaaatttctgat
gtgttgtctgttgctttatctgctggcagtgcctgttcgcgctatgtgggccgagtaatt
aaaggcattgatgtagccaagccaagccccttatggctgcaagaaaagttgcgccgcagc
ggtattcgctcaattgatgcagtcgtagatgtaacaaactatgtactaatcgagcttggc
cagcccatgcacgcatttgatttggcaaaaattaacggcggcattaatgttcgattggca
aacgcgaaagaagaattaactctgcttaacgatcaaaaagttgagctaaaagaagataca
ttggtaattgccgacgaatctggcgctctagccatggcaggcattatgggtggcgaagcc
agtgctgttacctctgcaacgcaagatatcttcctagaaagcgcattttttgagcctatt
gccattgctggccgtgcgcgttcgtatggtttgcatacagactcatctcaccgttttgag
cgcggcgtagattacaacggagcgcaagcggcaattgagcgtgctaccgccttattgttg
gaaatagtaggtggtcaagctggcccagtaattgttgctgaatcccaacaagatcttcct
tctgtaagtaacgtgaacttatctaaagcgcgcattgagtctggcttaggttttgccata
cccgatgtagaagttgaagatattcttacgcgtttaggcttaaagctggtagaaaggaac
gaaagcggctggacctttgccgtgcctagctatcgctttgacgtagcaattgaggccgac
ttgctcgaagagctggctcgtatatacggctacaacaacttgccgactaccaccgtacgt
attcctgctcagttgccatctaaaacagaaacggtaacgaagctcgatcgcattaaggat
catctggctagcaggggttaccgagaggtgatcacctatagctttgtcgaccctgcgctg
cagaacttgattaacggcgagcaggctaatgtccccattatcaacccaattagcagtgat
atgggcataatgcgaaccagtttgctgcctgggctgcttaacacgctatccaaaaacgta
aaacgccaagtacagcgcgttcgtatctttgaaagtgggttaacctttgtggctccagag
ggtatggattctcaaacgctcgaaggcttaacgcagccctctatgtttgcaggcttaatt
tacggtgcgcgagcgcccgtgggttggcatgcagataaagacgatgtcgatttttacgat
attaagggcgatttagagtcattgctggcctttactggtcaagcggtaacgtttgaatcg
gcggaggtgaaagcacttcaccctggccaaacggccaaggttaaactcgctggcacagaa
atagggtatattggcgcacttcacccagaagtggccaaacagcttgatttacctaaagcg
gcatatgtgtttgaagtgagtctagatgctattaagcaagctaaggtgccagctttcaca
gcgttgtcgagatacccagaagttgcccgtgatatagctatacttgttgataagggcgtc
aatggtgcggcgttagaggcagaaattcgttcagttgcgggggattacctcaaaaactta
aagatctttgacgtatatagcggcaaaggtattgatccacaacgaaaaagtattgctttt
aacttgatttttcagcacccttcacgcactctaactgaagatgagattagtgctccaatg
gctgaaatagtcaaaaaactggagcagtcgtttaacgcacaacttaggtag
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