Saccharophagus degradans: Sde_1677
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Entry
Sde_1677 CDS
T00335
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
sde
Saccharophagus degradans
Pathway
sde04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
Sde_1677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sde03016
]
Sde_1677
Enzymes [BR:
sde01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
Sde_1677
Transfer RNA biogenesis [BR:
sde03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
Sde_1677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
ThiI
QueC
ATP_bind_3
DUF7411
Motif
Other DBs
NCBI-ProteinID:
ABD80937
UniProt:
Q21K42
LinkDB
All DBs
Position
complement(2145011..2146153)
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AA seq
380 aa
AA seq
DB search
MAIEIAPFTPNDPRPANEITVIVGMSGGVDSSVSALLLKQQGYKVEGLFMKNWDEDDGTE
YCTAMTDLMDAAAVCQKLDIHLHTANFARQYWDNVFEYFLEEYKACRTPNPDILCNREIK
FKVFLEYAKKLGADYIATGHYTRTSQHEGCTQLRKGLDPNKDQSYFLHAVGEQEFAQTLF
PIGDIEKPQVRAIAEERGLVTHNKKDSTGICFIGERRFKDFLETYLPAQPGVIVDENGVE
IGKHQGLMYHTIGQRQGLGIGGVPGRPEAPWYVAEKRLQTNQLVVVQGSNHPLLFSNELT
TGAMHWINPRLAPTLSEPFRCTAKTRYRQPEQWCTLTANGDGVIAVFDEPQRAVTPGQSA
VFYQGDICLGGAVIETTRKH
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggccatagaaatagccccttttacgcccaacgacccgcgaccagccaatgagattacc
gtcattgttggcatgtctggcggcgtggactcctccgtttcggcgcttttgcttaagcag
cagggctacaaggtggaaggtttgtttatgaaaaactgggacgaggacgacggcacagaa
tactgcaccgccatgaccgacctgatggatgccgcagccgtatgccaaaaactcgatatt
cacctgcatacagccaatttcgcccgccagtactgggataacgtattcgaatacttccta
gaggagtacaaggcctgccgcacgcccaaccctgatattctatgtaatagagaaattaaa
tttaaagtattcctagagtacgccaagaaattgggtgcagattacatcgccacgggccac
tacacccgcaccagccaacacgaaggctgcactcaactgcgcaaaggtttagaccccaat
aaagaccaaagctactttctacacgcggtaggcgaacaggaatttgcacaaaccctcttc
cctattggtgacattgaaaagccacaagtgcgcgcaattgcagaagagcgcgggcttgtc
acccataacaaaaaagacagcaccggcatatgctttattggcgagcgtcgctttaaagac
tttctagaaacctacctgcccgcgcagcccggcgttatcgtcgatgaaaacggtgttgaa
attggtaaacaccaaggcttgatgtatcacaccattggccagcgccaaggcttgggcatt
ggcggcgtaccaggtcgcccggaagcgccttggtatgtggcagaaaagcgcttgcaaacc
aatcagctagtagtggttcaaggtagcaaccatcctttgctgttcagcaacgaacttaca
acaggcgctatgcattggataaacccacgcttggcaccaacacttagcgaaccatttcgc
tgcactgcaaaaacacgctaccgacaaccggaacagtggtgtacgctaacggctaacggc
gacggtgttatcgcagtattcgatgagcctcagcgcgccgtaacccctgggcagtccgct
gtattttaccaaggcgacatctgccttggtggggccgtaatagaaacaacgcgcaaacat
tag
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