Saccharophagus degradans: Sde_1722
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Entry
Sde_1722 CDS
T00335
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sde03009
]
Sde_1722
Enzymes [BR:
sde01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Sde_1722
Ribosome biogenesis [BR:
sde03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Sde_1722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
DUF4716
Motif
Other DBs
NCBI-ProteinID:
ABD80982
UniProt:
Q21JZ7
LinkDB
All DBs
Position
2195465..2196661
Genome browser
AA seq
398 aa
AA seq
DB search
MKTTDSSPQDEKLQKVLARAGQGSRREMERAITEGRVKVNGVVATLGDRVTESDKIQVDD
QYIRVKKGEADTTRVILYNKPEGQICSRNDPEGRPTVYDNLPRLKSGRWISVGRLDFNTS
GLLLFTNDGELAHKLMHPSSNIDREYLVRVQGEVDGDMLQRLRDGVLLEDGLAKFTDIVP
GAQEGSNRWFYCVVMEGKNREVRRLWESQECRVSRLKRVRYGNIFIPSNVRVGQWIELED
KELKELCQTADIPVPDRKFSAGLQDFRDRQRRRLESPGSKRSSRPNTKVPDARSRPSSAH
FDPEVTVGKAATPNAPKARMNTRSAPNFDNGSDTRQPKPRQQASKKTNSRNKDRRDEFDV
FTGELGTNRRSDKAKPSANRGDKPGKGPAGGRGSKPRR
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacaacagactcaagtccgcaggacgaaaaattacagaaagtattggcgcgcgca
ggccaaggctcgcgcagagaaatggagcgcgcaattactgaagggagagtgaaggtaaac
ggtgtggttgcgacgcttggcgaccgcgtgactgagtcagataagattcaggttgacgac
caatatatacgagtgaaaaagggcgaggccgacacaacacgggttattttatacaacaaa
ccagaaggccaaatttgttcgcgcaacgacccagagggcaggccaacggtatacgataat
ttaccccgcttaaaaagtgggcgctggatttcggttggtcgtctagatttcaataccagt
ggcttgctgctgtttaccaacgatggcgaactagctcataagctgatgcacccaagcagt
aatatcgatagagaatacttggtgcgagtgcagggcgaagtggatggcgatatgctgcag
cgtttgcgcgatggtgtattgctagaagatggtctggccaaatttaccgatattgtaccg
ggtgcccaagagggtagtaaccgctggttctattgcgttgtaatggaaggtaaaaacaga
gaagtgcgccgcctgtgggagtcgcaggagtgccgtgtaagccgcctaaagcgtgtgcgt
tatggcaacatatttattccatccaatgtgcgtgtagggcaatggattgagctagaagat
aaagagctaaaagagctgtgccaaactgcagatattcccgtgccagatcgcaagttttct
gcgggtttacaagattttagagatcgtcagcgccgccgcttggaatccccaggctctaag
cgcagtagtaggccaaacactaaggtgcctgatgctcgatctaggccttcttcagcccat
tttgaccctgaagtaacagtaggcaaagctgctacacctaacgcacctaaggcaaggatg
aatacgcgaagcgcgccaaattttgataatggcagtgatacgcgtcagcctaagccgcgc
caacaagcttcgaaaaaaacgaattctcgcaataaagatagacgggatgaatttgatgta
ttcacaggtgagctaggcaccaaccgccggtctgataaggcaaagccaagcgctaatcgc
ggtgataaaccgggtaaagggcctgcaggaggaaggggctcgaagccccgtcgttag
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