Saccharophagus degradans: Sde_1743
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Entry
Sde_1743 CDS
T00335
Name
(GenBank) TPR repeat
KO
K07114
Ca-activated chloride channel homolog
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sde02000
]
Sde_1743
Transporters [BR:
sde02000
]
Other transporters
Pores ion channels [TC:
1
]
Sde_1743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TPR_1
TPR_2
ANAPC3
TPR_11
TPR_14
TPR_8
TPR_16
TPR_12
TPR_7
Ssl1
TPR_10
TPR_6
Motif
Other DBs
NCBI-ProteinID:
ABD81003
UniProt:
Q21JX6
LinkDB
All DBs
Position
complement(2221348..2223324)
Genome browser
AA seq
658 aa
AA seq
DB search
MDSFQHFHFIRPYWLLAIIPALVIGVYLLRANLNRGNWNGVIAQHLLPYLIDKPTNTRGI
NPLIALIPLWVIASIALAGPTWKKINQPLKQDLSAVVILWDLSPSMLAEDLKPSRAARAK
YKLIDLFAKRQTGLSGLIAFAGEAHIVTPLTDDARTVKNLLNGLSPDMMPVQGSNPEMAL
ELAVKLLKEGGVARGDIIFVTDGIDPAAFNTLEHLIKPTQHRVTVWGFGSEQGAPIPLSG
NQGFAKTRSGEIIMTKRNDNELSEAAISMGGIYIPFSSTNADVDNIAASLSAADRTATKE
STKEYDLWEESGYYLVFLLLPFAALGFRRGWLFSFALLCIALPTQQTQAGIWEDLWLNKN
QQAQRALENGDAQTASKMFKDPQWKAVSEYKQKNYEQAAELFNQNTATDLYNRANALTQL
EKYDEAIAAYDEALSQNPNLAEAKHNKAIAEKLKALKEQQQSQDNQNGEDGEQGEDGEQG
DQQNADNQQQGEQNGEQNGEQSENQQGEQSGDNTQQSDESGEPSQSQEQALSEEQQQALE
EKYGQQSEEQNQQQQNAQQQPRESDEAENEEQAEQALQQQAMQQSEKTDEQQQAEQQALM
QMTAEQSEEQQALEQWLRKVPDDPSGLLRNKFYSESRKRRADSKPSIFTLEDDPKKRW
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggatagttttcagcacttccactttattcgcccctattggttactcgctattattcca
gcgctagtgattggcgtgtacctgctgcgcgcaaacttaaaccgcggcaactggaacggc
gtaatagcccaacaccttttgccctaccttatagataaaccaactaatactcgaggcata
aatccgcttattgcgcttatccccttatgggttatagcgagtattgctctagcaggcccc
acatggaaaaaaataaaccaaccgcttaaacaagatttatctgcggttgttattctgtgg
gacttatcaccttctatgctggctgaagatttgaaaccttcgcgcgcagctagagcaaaa
tacaaactaatcgatttatttgctaaacgccaaacggggttgagcggcttaatcgccttt
gcaggcgaagcgcatattgttaccccccttaccgatgatgcacgcacagtaaaaaatcta
ctgaacggcctctccccagacatgatgccggtacaaggtagcaaccccgaaatggcgctt
gaactagccgttaaacttcttaaagaaggtggcgtagcgcgaggggatattatatttgta
accgacggcatagacccagccgcgttcaacaccctagagcacctaattaaacctacacaa
caccgcgtaaccgtatggggctttgggtctgaacaaggggcgcctataccgcttagcggt
aaccaaggctttgcaaaaacgcgcagcggcgaaataataatgaccaagcgcaatgataat
gaactgagtgaagcagctatatctatggggggcatttatataccctttagctctaccaac
gccgatgtagacaatattgcagcctcgctaagcgcggccgaccgcactgcaacgaaagag
tccactaaagaatacgacctatgggaagaaagtggctattacctcgtttttttacttctg
cccttcgcagcactggggtttagacgaggctggttatttagctttgccctgctatgcatt
gcactacctactcaacaaacccaagcgggtatttgggaagatttatggttaaacaaaaat
caacaagcacaacgggcgcttgaaaatggcgatgctcaaaccgccagtaaaatgtttaaa
gacccacagtggaaagctgtaagcgaatacaagcaaaaaaattacgagcaagccgcagaa
ttatttaaccaaaatacagcgaccgacttatacaaccgcgccaatgcgttaacacagcta
gaaaaatacgatgaagctatagccgcttatgatgaagccctaagccaaaacccgaatttg
gccgaagccaaacacaacaaagccattgctgaaaaattaaaggcgctaaaggagcaacaa
caaagccaagacaatcaaaatggcgaggatggcgaacagggcgaggacggagaacaagga
gaccaacagaacgctgataatcaacagcaaggagagcaaaacggagaacagaatggagag
caaagcgaaaatcagcaaggtgagcaatccggcgataacacacagcaatctgacgaatcc
ggcgagcctagccaatcacaagagcaggccctttctgaggagcaacaacaagccctagaa
gaaaagtacggccaacagagcgaagagcaaaaccaacagcagcaaaacgctcagcaacaa
cccagagaaagtgatgaagctgagaacgaagaacaggctgagcaagcgctacaacagcaa
gcaatgcagcaaagcgaaaaaactgacgaacaacaacaagcagaacaacaagcgctaatg
caaatgacagcagagcaaagtgaagaacagcaagcgcttgaacaatggctgcgcaaagta
cccgacgacccttcgggtttattgcgcaataaattctattctgaaagccgtaaacgccgc
gccgatagtaagccgtcaatatttacgcttgaagacgatccaaaaaaacgctggtga
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