Saccharophagus degradans: Sde_1879
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Entry
Sde_1879 CDS
T00335
Name
(GenBank) condensin subunit Smc
KO
K03529
chromosome segregation protein
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sde03036
]
Sde_1879
Chromosome and associated proteins [BR:
sde03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
Sde_1879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
SMC_hinge
AAA_29
EzrA
Motif
Other DBs
NCBI-ProteinID:
ABD81139
UniProt:
Q21JJ0
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All DBs
Position
2369962..2373468
Genome browser
AA seq
1168 aa
AA seq
DB search
MRLKSIKLAGFKSFVDPTTVNFPSNLCSVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES
MTDVIFNGSGGRKPVGQASIELIFDNSDATITGEYAGFNEISIKRKVTREAQNFYYLNGS
KCRRRDITDIFLGTGLGPRSYAIIEQGMISKLIEAKPEELRVFIEEAAGISKYKERRRDT
ENRMRRTHENLERLTDIREELERQLLRLERQAQAAEKYTEFKKEERQLKADLQALRYQKL
KVQADQKQNTIRDLELSVEAGVTEQVKFDAQIEKFRSEHTDFGDAFNEVQGRFYSIGADI
ARIEQTIQHAQERERQLKVDLEQTERDCREAEEHLANDTHKAEGWEAELLEIEPDLGTIK
ETEELSAAMLLESEEAMQHWQQEWDQFNQTAAEPRQQAEVQQSRIKYLDQVQQRLLDRIR
KLESERENLVVGDVEEDIEILEEELGTLDLQIEEKAEAAQQVAEEITELRERQQKLTDER
DQYRSELQTSKGRFASLEALHQAAMGESGGAVSEWLETQGLAGNKRLAENLDVETGWEKA
AEVVLGSSLQAVCVDSSLDTFSDLLNDLTGGELLLIEPNAGAAYASGAETLASKIKSSHL
PAGILAGVLVAEDLTAAMAMRSSLTAEQSIVTKDGLWLSKNWLRVIKASDANDGIIARKQ
EMETLRESLDVLEEKIETITEELESVKLQLSDKETQRDSLRSESEQIQRSHGETRAQLSA
KRAKVEQVLEGRERTDRDIKEAKEQLSAESENLVEARAILEEAILAMETDTEKRESLLSQ
RDDIRSKLDNARQQARHDRDRAHELAMRAQSVKTQLESIKQGIQRLQDQMQRMQERRETL
RMALEENRDPVEENKLELEALLEKRVAVEEELNRARQALETVETSLRDVEKQRHQVEQQI
AELRMRLESSRLEAQTFAVKSENLRQQLLDDDFDLENVLANLDESLTEENLEQELERIAN
RISRLGAINLAAIEEYKIESERKLYLDSQNEDLREALETLENAIKKIDRETRTRFKETFD
QVNSGLQELFPKVFGGGHAYLELTGEDMLDTGIAIMARPPGKKNSTIHLLSGGEKALTAI
ALVFSIFRLNPAPFCMLDEVDAPLDDANVGRYARMVEEMSKQVQFIYITHNKIAMEMAHQ
LLGVTMHEPGVSRMVTVDVDEAAELAAS
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttaaaagtatcaaattagcgggttttaaatctttcgtagaccctacaaccgtt
aattttcctagcaacctttgctctgtagttgggccgaatggttgtggtaaatcgaatatt
atcgacgctgtgcgatgggttatgggcgagtcttccgctaaaaacctgcgtggcgaatcc
atgacggacgttatttttaacggttccggtggccgcaagcctgttggtcaagcatctatc
gagcttattttcgataacagtgatgcaacaattaccggtgaatacgctggtttcaacgaa
atatctattaagcgtaaagtaacgcgcgaagcgcaaaacttttattacctaaacggcagt
aaatgccgtcgtcgtgacattaccgacattttccttggtaccggtttgggccccagaagt
tatgccattattgagcagggcatgatttctaaattgattgaggctaaaccagaagagctg
cgcgtatttattgaagaggccgccggcatctctaaatataaagagcgccgtcgcgatacc
gaaaaccgtatgcgccgtacgcacgaaaaccttgagcgcttaacagatatccgcgaagag
ctagagcgtcaattactgcgtttagagcgccaagcgcaggctgctgaaaaatacaccgaa
tttaaaaaagaagagcgccagctgaaggccgatttgcaagcgctgcgctatcaaaaactg
aaggtacaagcagatcaaaaacaaaacactatacgcgacttagagctaagcgtagaagcg
ggtgtgaccgagcaagttaaatttgatgctcaaatagaaaaattccgttcagagcacaca
gatttcggcgacgcatttaacgaagtgcagggccgcttttactcaattggtgccgatata
gcacgtattgagcaaaccattcagcatgcgcaagagcgcgagcgtcaattaaaagtcgat
ctcgagcaaacagagcgcgattgtcgcgaagctgaagagcatttagcgaatgacacccac
aaggcagagggctgggaagcagagctgttagaaattgagccagacttgggcacaattaaa
gaaacagaagagctttctgccgctatgttgcttgaatctgaagaagccatgcagcattgg
caacaagaatgggatcagtttaaccaaactgctgcagagccgcgccagcaggccgaagta
cagcagtcacgtattaaatatttagatcaagtgcaacagcgcttactcgaccgtattcgc
aagctagagagtgagcgagaaaacttggttgtaggcgatgtagaagaagatatcgaaatc
ctcgaagaagagcttggtactctcgacctgcaaattgaagaaaaggcggaagctgcccaa
caggtagccgaggaaataactgagcttcgcgagcgccagcaaaagcttaccgacgagcga
gatcaataccgttctgagttacaaaccagcaaggggcggtttgctagtttagaagcgttg
catcaggctgccatgggtgaaagtggcggtgcggtaagcgagtggctagaaacccaaggt
ttggcgggtaataagcgcttagccgaaaacttagatgtggaaaccggttgggaaaaggcg
gcagaagtcgttttgggctcgtctctgcaggctgtatgtgttgattcaagcctagatact
tttagtgacctgttaaacgatttaaccggtggcgagttacttttaattgagccgaacgca
ggggcagcttatgccagcggtgcagaaacgctggcaagcaaaattaaatcaagccattta
cctgcgggtattttggcgggcgtattggtcgccgaagatttaacagcggcaatggctatg
cgcagcagccttactgcagagcaatctatcgttactaaagatggcttgtggttaagcaaa
aactggttgcgagtaattaaagcttccgatgctaacgatggcattattgcgcgtaagcaa
gagatggaaacattgcgcgagtcgctcgatgtactggaagaaaaaattgaaaccattaca
gaagagctagagagcgttaagttacagctgtcagataaagaaactcagcgcgatagtttg
cgcagcgagtcggaacaaattcagcgcagccacggtgagactcgagcgcaattaagtgct
aagcgagccaaggtagagcaggtgctcgaagggcgtgagcgcacagatagggatataaaa
gaagcaaaagagcagctgagtgcagaatctgaaaacctagttgaagcgcgtgcaatttta
gaagaagccattctcgcaatggagaccgacacggaaaaacgcgaaagcttgcttagccag
cgtgacgacattcgttctaagctcgataacgcaaggcaacaagcgcgacatgaccgcgat
cgtgctcatgagctggctatgcgtgctcagtcggtaaaaacacagctagaatccattaag
cagggaattcagcgtttgcaggatcaaatgcagcgcatgcaagagcgccgtgaaacgctg
cgcatggctctagaagaaaaccgcgaccctgtagaagaaaataaattagagctggaagcg
ctactcgaaaaacgtgttgcagtcgaagaggaactcaatcgagctaggcaagcattggag
acggttgaaacctcattgcgtgatgtggagaagcagcgtcatcaggttgagcagcaaatt
gccgaattgcgtatgcgtttggaatcatctcgtttagaagcgcaaacttttgcagttaaa
agcgaaaaccttcgtcagcaattacttgatgatgactttgacctagaaaatgttttagct
aacttagatgaaagcttaactgaagagaatttagagcaagagctagagcgtattgcaaat
cgtatttctcgcttaggtgctattaaccttgccgctatcgaagaatataaaattgagagt
gagcgaaagttatatttagatagccaaaacgaagatttaagagaggcacttgaaacccta
gaaaacgccattaaaaagatcgatcgggaaacgcggacacgcttcaaagaaacgtttgat
caggttaactctggtctacaagagttgttccccaaagtgtttggtggcggtcatgcatat
ttagagcttaccggtgaggatatgcttgataccggtattgcgattatggctaggccccca
ggcaagaaaaacagcacaattcacctgttgtctggtggtgaaaaggcgctaacagctatt
gctttggtattttctatcttccgcctaaacccagcgccattctgtatgctggatgaggtt
gatgcgccgctagatgacgcgaacgtggggcgttacgcgcgcatggttgaagaaatgtcg
aagcaggtacaatttatttatattacgcataacaaaatagccatggaaatggcgcaccag
ctattgggggttaccatgcatgaaccgggtgtatcccgaatggtaacagtagatgtcgac
gaagcagccgagcttgctgcgagttaa
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integrated database retrieval system
