Saccharophagus degradans: Sde_2021
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Entry
Sde_2021 CDS
T00335
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sde
Saccharophagus degradans
Pathway
sde03030
DNA replication
sde03430
Mismatch repair
sde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sde_2021
03430 Mismatch repair
Sde_2021
03440 Homologous recombination
Sde_2021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sde03032
]
Sde_2021
03400 DNA repair and recombination proteins [BR:
sde03400
]
Sde_2021
Enzymes [BR:
sde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sde_2021
DNA replication proteins [BR:
sde03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sde_2021
DNA repair and recombination proteins [BR:
sde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sde_2021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ABD81281
UniProt:
Q21J48
LinkDB
All DBs
Position
complement(2545625..2546341)
Genome browser
AA seq
238 aa
AA seq
DB search
MRQIVLDTETTGLEPSQGHRIIEIGCVELINRKLTGRHYHQYIKPEREIDEGAIEVHGIT
NEFLADKPVFKDIADEFMAFVDGAELVIHNAPFDVGFLNHEFNLLGRGSTVINDRCSILD
TLALARNKHPGQKNNLDALCKRYGADNSARDLHGALLDAEILADVYLLMTGGQTNLALGG
AGSSSGMDDGGEELVRVSADRKPLPIIRASAEELALHEKKLAEIDKASGGECLWLKQS
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgagacagatagttctcgataccgagacaacgggcctagagccaagccaaggccaccga
attattgagatagggtgtgttgagctaataaatcgaaagcttacgggccgtcattatcac
cagtacattaaacctgaacgggaaattgatgaaggcgcaattgaagttcacggcattacc
aacgaatttctagcagacaaaccggtttttaaagatatagccgatgagtttatggcgttt
gttgatggtgcagaactagtcattcacaacgcaccgttcgatgtgggctttctaaatcac
gaatttaaccttctagggcgtggcagcacagttataaacgaccgctgttctattctcgat
acgctcgcactagcaagaaacaagcaccctgggcaaaagaacaacctggatgccctgtgt
aagcgttacggcgcagataactccgcacgagaccttcacggcgctttgctcgatgctgaa
attctagccgatgtttacctgttaatgaccggtgggcaaaccaaccttgccctaggtggt
gcgggttcgtctagtggcatggacgacggtggtgaagagcttgtacgtgtaagtgccgat
cgcaaaccgctccccattataagagcgtctgcagaagagctggctttacacgagaaaaag
ttggctgaaatagacaaggcttcaggcggcgaatgcctctggctcaagcagtcataa
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integrated database retrieval system
