Saccharophagus degradans: Sde_2027
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Entry
Sde_2027 CDS
T00335
Name
(GenBank) extracellular solute-binding protein, family 5
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
sde
Saccharophagus degradans
Pathway
sde01501
beta-Lactam resistance
sde02010
ABC transporters
sde02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Sde_2027
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sde_2027
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Sde_2027
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sde02000
]
Sde_2027
Transporters [BR:
sde02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
Sde_2027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
IFN-gamma
Motif
Other DBs
NCBI-ProteinID:
ABD81287
UniProt:
Q21J42
LinkDB
All DBs
Position
2553958..2555625
Genome browser
AA seq
555 aa
AA seq
DB search
MLNRKSFARKINTLAFSLTVAFAALLVGCSSDKSTSQDPEQTLHMAFGAEPQTLDPHMAA
GVPDLRLLAAIIEPLAELDPHTFEAVPALAKSWDISEDGLVYTFHLRENAKWSDGTPLTA
QDFVFSWQRILSPAIGGYYVQDYYNIVGAEDFNTGKSEDFTSVGVKAISNHALQFTLLKP
DPLFVKRMAHETVGPVQPATILKFGNIDDATSKWTQPPNYVSNGPFVMTRWEINKVIVLE
KNPHYWDAENVKLEKIYAYPIEDIATEERMFRSGQIHVAWGGHIPTEKIETYQKESPEKI
IITPMYGTYFYIFNNQVAPFDNADVRRAFTYALDREMLTSKIAKGGKQPATTLSLPVPHF
NPDSPIEYNPQKAAEYLAKAGYPNGEGFPQIALLYNTDELHKKIAVAAQQMWKKHLNVNI
TLENQEWKFFLENRKNKTFTLARGGSISTFADPIDFLQSYMTGHGMNDSDYRNSDFDALV
KKALYELDPVKRGAYLEEAEELLLNEAAIAPVLTYTEVFLKAPEVKNAIFSATARPNYKD
IYLDFSTAAQQPQSE
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaccgtaaaagctttgctcgtaaaattaatacactagcattttctcttactgtt
gctttcgcagcgcttttagttggttgcagctccgataaaagcaccagccaagacccagag
caaactctgcatatggccttcggcgccgagccgcaaacgctcgaccctcatatggccgca
ggcgtaccagatctaagactgctagcagctataatagaacccctagcagagctagaccca
cacaccttcgaagcggtgccagcacttgctaaaagctgggatatatctgaagacggtttg
gtttatacgtttcacctgcgcgaaaatgcaaaatggtccgacggtacacctttaacagcg
caagattttgtatttagctggcagcgcatactttcaccggctattggtggttattacgta
caagactattacaacatagtcggcgccgaagattttaatacaggtaaaagcgaagatttc
accagtgtgggcgtaaaagccataagcaaccacgccctgcaatttactttgctaaaacca
gaccctctgtttgtcaaacgcatggcacatgaaacagtaggcccggtgcaaccggcaact
attttaaagtttggtaacatagacgacgccacctcaaagtggacccagccccctaactat
gtttctaacggcccatttgttatgacccgctgggaaattaacaaagtgatagtgctagag
aaaaacccccactactgggatgccgaaaacgtaaaactagaaaaaatttacgcctatccc
attgaagatatagccacagaagagcgcatgtttcgttccggtcaaattcatgtagcgtgg
ggcggccacatacctaccgaaaaaattgaaacttatcaaaaagaatcgccagaaaaaatc
atcattactccaatgtacggcacttatttttatatttttaataatcaagtcgccccattt
gataatgccgatgttcgcagagctttcacctatgcgctagaccgtgaaatgctaacctct
aaaattgcaaaaggcggtaagcaacctgctaccacgctcagtttgcctgtaccgcacttc
aaccccgactcgcccattgagtataacccacaaaaagcagcggaatatcttgctaaagcg
ggttaccccaatggtgaaggctttccgcaaattgcgctgctgtataacaccgacgaatta
cataaaaaaatagccgttgccgcgcagcaaatgtggaaaaaacacttaaacgtaaacata
acgcttgaaaaccaagagtggaaattctttttagaaaacagaaagaataaaacattcaca
ttggcgcgcggtggttctattagcacctttgcggacccaattgattttctgcaatcctac
atgaccggtcacggcatgaatgattcagactatagaaattcagattttgacgcgctggtt
aaaaaagcactttacgaactagacccggtaaaacgcggggcttatttggaagaagcagaa
gagcttttgctcaatgaggctgcgatagcgccggtattaacctatacggaagttttcttg
aaagcgcccgaggttaaaaacgccattttcagcgcaactgcaagaccaaactataaggat
atttatctcgacttttcgacagcagcgcaacaaccacaaagcgagtaa
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