Saccharophagus degradans: Sde_2028
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Entry
Sde_2028 CDS
T00335
Name
(GenBank) extracellular solute-binding protein, family 5
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
sde
Saccharophagus degradans
Pathway
sde01501
beta-Lactam resistance
sde02010
ABC transporters
sde02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Sde_2028
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sde_2028
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Sde_2028
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sde02000
]
Sde_2028
Transporters [BR:
sde02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
Sde_2028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF5527
Motif
Other DBs
NCBI-ProteinID:
ABD81288
UniProt:
Q21J41
LinkDB
All DBs
Position
2555634..2557268
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AA seq
544 aa
AA seq
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MIKNICFVLLATTLMFVSACSKNTLTNVEKGNRDSELYIANADEPESLDPHVASGSPDAN
IILGLFEGLASLDPKTLEPSAGVATHWDISEDGKVYTFYLRENAKWSNGDNVTAHDFIYS
WRRALQPALAAKFAYMMYPIKNAEAFNTGKLTDFNEVGVKALTDYTLEITLAHPTPYFIL
LLDHHSFYPVHKATIEKHGEIDNPNTLWTRAENFVGNGPFTLAEWKINQHIKLAKNPHYW
DANTVKLNALHFLPITDQQAEERAFRTGQVHLTYSPQMANEKIATYRDNHPDVFQAYYTY
SSYYYVFNTKRAPFDNIKVRQAFSMAIDRESITKNVTKGGEIPTFSVIPPDPQGYKPKAY
YGYNPEKAKQLLAQAGYPNGKGFPTFYIHYNTLETHKKVAVAVQQMLKNVLNIDVQLHNE
EWKVYLSTQKNHNFDVTRQAWIADYADPSNFFEIFLSYGGNNHSQWDNKQYDALVEEAAR
TMDSAKRFELFEQANKILADEMPIMPIYLYSDINLVQPYVKNWHPNILHRHHYKTVYLDP
PEAP
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaacatctgttttgtattgcttgcaactacactaatgtttgttagcgcatgc
agcaaaaatacattaaccaatgtggaaaagggcaaccgcgacagcgagctttatatagca
aatgccgacgagcccgaatcgctagacccccacgttgccagtggtagccccgacgccaat
attattctaggcctgtttgaaggcctagcttcattagacccgaaaacactagaaccctct
gccggtgtggctacacactgggacatttctgaagatggaaaggtgtataccttttaccta
agggaaaacgcaaagtggtctaatggcgataatgtaaccgcccacgattttatctattct
tggcgacgtgcattacagccagccttagctgcaaaattcgcctacatgatgtaccccatt
aaaaacgcagaggccttcaacactggtaaactcaccgattttaacgaagtaggtgtaaag
gcgttaacagactacacactcgaaattacccttgctcaccccaccccctattttattttg
ctgcttgaccatcattctttttaccctgtacataaagcaactattgaaaagcatggcgaa
atagacaaccccaacacactgtggacacgcgcagaaaactttgtgggtaacggccctttt
actcttgccgagtggaaaatcaaccaacacattaaactagctaaaaacccacactactgg
gatgccaatacagttaagttaaacgcccttcactttttacccataaccgatcaacaagcg
gaagagcgcgcatttcgtacaggccaggtgcaccttacatattcaccacaaatggctaac
gaaaaaatagcgacctatagagataatcaccctgatgtttttcaggcctactatacctac
agtagttattactacgtgtttaataccaagcgagcgcccttcgacaacattaaagttagg
caggcgttctctatggctatagatagggaatccatcactaaaaacgtaaccaaaggcggc
gagatcccgactttctcggttattccaccagacccgcaaggctacaaacccaaagcctat
tacggttacaacccagaaaaagccaagcagctactcgcacaggcgggctaccccaatggc
aaagggtttcctaccttttatatccactacaatacgctagaaacccacaagaaagttgcg
gttgcggtacagcaaatgcttaaaaatgtattgaatattgatgtgcaacttcacaacgaa
gaatggaaggtatacctaagtacgcaaaaaaatcacaacttcgatgtaacccgccaagct
tggattgcagactacgctgacccaagtaacttttttgagatatttttatcctacggcggg
aataaccattcgcaatgggacaacaaacaatacgatgcgttggtagaagaagctgcgcgc
acaatggattccgcaaagcgctttgagttgtttgagcaagccaacaaaattttggccgac
gaaatgccaataatgcctatttatttgtattcagacatcaacctagtgcagccctatgta
aagaattggcaccccaacattctgcataggcaccactacaaaacagtttatctagatcca
ccagaggcaccttaa
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