Saccharophagus degradans: Sde_2081
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Entry
Sde_2081 CDS
T00335
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sde03016
]
Sde_2081
Enzymes [BR:
sde01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Sde_2081
Transfer RNA biogenesis [BR:
sde03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Sde_2081
Prokaryotic type
Sde_2081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ABD81341
UniProt:
Q21IY8
LinkDB
All DBs
Position
complement(2661321..2662190)
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AA seq
289 aa
AA seq
DB search
MTEFVYSRNCEVFDGTPVPEGMRRVVLQVEYDGSPYCGFQRQLTAPNTVQAELEKALSSV
ANEPVTIVCAGRTDAGVHATSQIVHFDTLAGRPSKAWLQGVNTHLPFSIRVISAKEVGFD
FHARFSALSRTYRYVIHVSQVRSAHLVNGVTWVKLPQKLSGLDVPAMQEAASLLLGEHDF
TSFRTVHCQAASPVRTMEVADVVQMGEFIVVQVTANAFLHHMVRNIVGVLLRVGRGELKP
SRVTELIELRDRSQAAETAPAAGLYFVNVQYPERFAMPMHCQGPIFLPL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatttgtatactcaagaaactgtgaggtgtttgacggtacgccagtgccagaa
gggatgcgtcgcgtggtgctgcaagtggaatacgatggctctccctattgtggttttcag
cgtcagctaaccgcgccaaatacggttcaggcagagttggagaaggcgctgtctagtgtc
gcaaatgagcctgttacgatagtgtgcgctgggcgaacggatgcaggggtgcatgctaca
tcgcagatagttcacttcgataccttggcaggcaggcctagcaaggcctggttgcagggg
gtaaacacgcatttaccatttagtatacgcgttatatctgctaaagaagttgggtttgat
tttcatgcgcgttttagtgctttatcgcgtacttaccgttatgtgattcatgtttcacag
gtgcgctctgcccatttggtgaatggcgtaacttgggtgaagttaccgcagaagctaagc
ggtctggatgtacctgcaatgcaggaggcggctagcttattgttgggtgagcacgatttt
acctcatttcgaacggtgcactgtcaggcggctagccctgtacgcactatggaggtggcc
gatgttgtgcaaatgggtgagtttattgttgttcaggtaacggcaaatgcctttttacat
catatggttaggaatattgtaggagtgttgctgcgtgttgggcgaggggagctgaagcct
tcgcgggtaactgagttgattgagctgcgggaccggtcacaagctgcagagactgcgccg
gcagcggggctatacttcgtgaatgttcaatatccagaaaggtttgctatgcctatgcac
tgtcaaggccctatttttctgcctttatag
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