Saccharophagus degradans: Sde_2103
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Entry
Sde_2103 CDS
T00335
Name
(GenBank) succinyl-CoA synthetase (ADP-forming) beta subunit
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
sde
Saccharophagus degradans
Pathway
sde00020
Citrate cycle (TCA cycle)
sde00640
Propanoate metabolism
sde00660
C5-Branched dibasic acid metabolism
sde00720
Other carbon fixation pathways
sde01100
Metabolic pathways
sde01110
Biosynthesis of secondary metabolites
sde01120
Microbial metabolism in diverse environments
sde01200
Carbon metabolism
Module
sde_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sde_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Sde_2103
00640 Propanoate metabolism
Sde_2103
00660 C5-Branched dibasic acid metabolism
Sde_2103
09102 Energy metabolism
00720 Other carbon fixation pathways
Sde_2103
Enzymes [BR:
sde01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
Sde_2103
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Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
ABD81363
UniProt:
Q21IW6
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All DBs
Position
complement(2686539..2687705)
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AA seq
388 aa
AA seq
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MNLHEYQGKQLFAEYGLPVSKGIAAETPAEAAAAADIIGGDKWVVKAQVHAGGRGKAGGV
KLVSSKAEIEEFAKKWLGNNLITYQTDENGQPVSRILVESCTDIADELYLGAVVDRSTRR
VIFMASTEGGVEIEKVAEETPEKILKAIIDPLTGAQPYQARELGFKLGLNPVQIKQFTQI
FLGLAKMFVDKDLALLEINPLVITDEGNLHCLDAKVAIDGNAMYRQPALKEMHDPSQEDE
REAHAAKWELNYVALDGNIGCMVNGAGLAMGTMDIVKLHGGQPANFLDVGGGATKERVVE
AFKIILSDDNVKAVLINIFGGIVRCDLIAEGVIGAVEEVGVKVPVVVRLEGNNAELGAKV
LADSGLNIIAAESLTDAAVQVVKAAEGK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacatgaatatcaaggcaaacagctttttgctgaatatggtttgccagtatct
aaaggcatagctgcagaaactcctgcagaagcggcagcagctgcagacattattggtggt
gataagtgggttgttaaagctcaggttcacgctggtggtcgcggtaaagcgggcggcgtt
aaattggtttctagcaaagcagaaatcgaagagttcgctaaaaagtggttaggtaataac
ttaattacttatcaaacagatgaaaatggtcagccagttagccgtattttggttgaaagc
tgcaccgatatcgctgacgaattgtacttgggtgcagttgtagaccgttctactcgtcgc
gtaatttttatggcgtctactgaaggcggcgtagagattgaaaaagttgctgaagaaact
ccagaaaaaatcttaaaagcgattatcgatcctttgactggcgcacagccatatcaagct
cgcgaattaggttttaaattgggcttaaacccagttcaaatcaagcaattcacccaaatc
tttttaggtttggcgaaaatgtttgttgataaagacttggctcttttagaaatcaaccca
ttggttattactgatgaaggtaacttgcactgcctagacgctaaagtagctatcgacggc
aacgcaatgtaccgtcagcctgcgcttaaagaaatgcacgatccttcacaagaagacgag
cgtgaagcgcatgcagctaaatgggaacttaactacgtagcactagatggcaacatcggc
tgtatggttaacggtgctggtttggcaatgggtactatggatatcgtgaaattacacggt
ggccaacctgcaaacttcctagacgtaggcggcggcgcaactaaagagcgcgttgttgaa
gcattcaaaattattctttctgacgacaacgtaaaagctgttttaattaacatctttggc
ggtattgttcgttgtgacctgattgcagaaggtgtaatcggcgcagtggaagaggttggt
gttaaggttcctgttgttgttcgtttagaaggtaacaacgcagaattgggtgcaaaagtg
ttggcagatagtggcctaaacattattgctgcagaaagcttaactgatgctgcagtacaa
gttgttaaagctgcggagggcaaataa
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