Saccharophagus degradans: Sde_2108
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Entry
Sde_2108 CDS
T00335
Name
(GenBank) succinate dehydrogenase subunit A
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
sde
Saccharophagus degradans
Pathway
sde00020
Citrate cycle (TCA cycle)
sde00190
Oxidative phosphorylation
sde00650
Butanoate metabolism
sde00720
Other carbon fixation pathways
sde01100
Metabolic pathways
sde01110
Biosynthesis of secondary metabolites
sde01120
Microbial metabolism in diverse environments
sde01200
Carbon metabolism
Module
sde_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sde_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sde_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Sde_2108
00650 Butanoate metabolism
Sde_2108
09102 Energy metabolism
00190 Oxidative phosphorylation
Sde_2108
00720 Other carbon fixation pathways
Sde_2108
Enzymes [BR:
sde01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Sde_2108
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
GIDA
DAO
Thi4
FAD_oxidored
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
ABD81368
UniProt:
Q21IW1
LinkDB
All DBs
Position
complement(2694549..2696321)
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AA seq
590 aa
AA seq
DB search
MANMRTITFDGIVIGGGGAGMRAALQMAQSGFKTAVVTKVFPTRSHTVSAQGGITCAIAS
ADPQDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTENGRIYQRP
FGGQSKDFGRGGQAARTCAAADRTGHALLHTLYQGNVKNNTVFLNEWFAVDLVKNQDGAV
CGVIAINMEDGETVFIKSKATVLATGGAGRIFASTTNAHINTGDGVGMALRAGVPVQDIE
MWQFHPTGIHGAGVLVTEGCRGEGGYLVNKDGERFMERYAPNAKDLAGRDVVARSMVLEI
LEGRGCGENADHVFLKLDHLGADTLNAKLPGILELSRTFAHVDPIKDPIPVVPTCHYMMG
GIPTNVHGQALTQDANGNDQVVEGLYACGEVACVSVHGANRLGGNSLLDLVVFGRASGLF
IEKSLREGIELRDPSATDMDAAMSRLNKVNNSTGGESAPALRTEMQGIMQNHFGVFRRGD
MMEVGIAKLAEMRERIANVALEDKSNAFNTARIEALELQNLFEVAEATAIAAEVRKESRG
AHARDDFQERDDKEWLCHSMYFPGEKRVGKRAVNFSPKTMEAFEPKARTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctaatatgagaaccattacattcgacggtattgttattggcggcggcggtgcgggt
atgcgcgctgcgttgcaaatggcgcaatccggttttaaaactgcggttgtaactaaagta
tttccaactcgctcgcatactgtatccgctcagggcggtattacttgcgctattgcaagt
gccgacccgcaagatgattggcgctggcacatgtacgacaccgtaaaagggtcggactac
attggtgaccaggacgcaattgagtatatgtgctctgtgggcccagaagctgtgtttgaa
ctcgagcacatgggtttgcctttctctcgtactgagaatggccgtatttatcagcgccca
tttggtggccaatctaaagactttggtcgcggcggtcaggcagcgcgtacttgtgcagca
gcagaccgtactggtcacgctttgttgcacaccttgtatcaaggtaatgttaaaaataac
actgttttcctaaacgagtggtttgcggttgatttggttaaaaaccaagatggcgctgta
tgcggcgttatcgcaatcaatatggaagacggtgaaaccgtatttattaagtctaaagcg
actgtgttggctactggtggtgcagggcgtattttcgcatctaccactaacgctcacatc
aatactggtgacggtgttggtatggcgttgcgcgctggcgtaccggtgcaagatatcgaa
atgtggcagttccacccaaccggtattcacggtgcaggtgtgcttgttacagaggggtgt
cgcggtgaaggtggctacttagtaaacaaagacggcgagcgctttatggagcgttatgct
cctaacgcaaaagaccttgctggtcgtgacgttgtagctcgctctatggttcttgaaatt
ctagaagggcgtggttgcggcgaaaatgccgatcacgtgttcttgaagctagaccatttg
ggcgcagacacgctaaacgctaagttgcctggtattttggagctttcgcgtacatttgcg
catgttgacccaattaaagacccaatccctgtagtgcctacttgtcactatatgatgggt
ggtattccaactaacgttcacggccaagcgcttactcaagatgctaacggcaatgatcaa
gtggttgaaggtttgtacgcttgtggtgaagtggcttgtgtatctgtacacggcgctaac
cgtttgggcggtaactcgttgctagatcttgttgtatttggtcgtgcatctgggttgttt
atcgagaaatctctacgtgaaggtattgagttgcgcgacccaagtgcaaccgatatggat
gcagcgatgtctcgtttgaacaaagtaaataactctactggcggtgagtctgcgcctgcg
cttcgcacagaaatgcagggtattatgcagaaccacttcggtgtattccgtcgcggcgac
atgatggaagtaggtattgctaagttggcagaaatgcgtgagcgcattgctaacgtagcg
ctagaagataagagcaacgcgtttaacactgctcgtattgaagcgcttgagctgcaaaac
ctgtttgaagttgctgaagccactgcaattgccgcagaagttcgtaaagaatctcgcggt
gcgcacgctcgtgatgatttccaagagcgtgatgataaagaatggttgtgtcactccatg
tatttcccaggggaaaaacgtgtaggcaagcgcgcagttaacttttcgcccaaaacgatg
gaagccttcgagccaaaagctcgtacttactag
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