Saccharophagus degradans: Sde_2188
Help
Entry
Sde_2188 CDS
T00335
Name
(GenBank) flagellar M-ring protein FliF
KO
K02409
flagellar M-ring protein FliF
Organism
sde
Saccharophagus degradans
Pathway
sde02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sde_2188
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sde02044
]
Sde_2188
02035 Bacterial motility proteins [BR:
sde02035
]
Sde_2188
Secretion system [BR:
sde02044
]
Type III secretion system
Flagellar export apparatus
Sde_2188
Bacterial motility proteins [BR:
sde02035
]
Flagellar system
Flagellar assembly proteins
M, S, P and L rings
Sde_2188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YscJ_FliF
YscJ_FliF_C
T4SS_pilin
Motif
Other DBs
NCBI-ProteinID:
ABD81448
UniProt:
Q21IN1
LinkDB
All DBs
Position
complement(2783820..2785490)
Genome browser
AA seq
556 aa
AA seq
DB search
MAQAPAHTSTNDLIDGFNNLNIIRQAGLMVGLAASVAIGFAVVLWSQGEDYKPLYGSLDR
LDSSEVGAILDFNEIPYKIDGSTGALLVAVDEVHRARLVLAENGIQGDNSTGYELLDQEQ
PLGTSQFMEATRYKRGIEGELARTIASINSVRGARVHLAIPKRSVFVGDGRKPSASVFLD
LYPGRPIKPKQIQGIANLVASSIPELQVENVTVVDQKGNLLTTGIAEDKDLLIAGQHLEY
TQKVEDGMIMRVRRLLSPILGDQNFKTEVAADIDFTEIEQAEEVFNPDLPAVRSEQTVEE
QRIGSGAPGGIPGALTNQPPADGQAPEQAGQGGEGAGGQPSNTRSQAVRNYELDRTVSYT
KREKGRLRRLTVAVVIDDKKTINPETGAVERTQWTQQELERFAILVRDAVGYSAVRGDSV
NILNEAFLPEPAIEVLDDLPFWQNESILKLIKPIAGALIIVALLVGLVRPVLKSLAVAGV
KTREQDEAKEMAALQAAGMDGFDSLSDETVTLTGGDALALPSPEEGYEQQLNAVKGLVAE
DAGRVAQVIKRWINEE
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcccaagcgcccgcgcatacaagcactaacgatctaatagatgggtttaacaaccta
aacattattcgccaagccggtttaatggtagggcttgcggcaagtgtggctattggtttt
gcggttgtactttggagtcaaggggaagattacaaaccgctatatggtagtttggatcga
ttagattcttctgaagtaggcgcgattttagattttaacgagattccctacaaaatagat
ggctcgaccggtgcgctgctagtggcggtggatgaagtgcatagagcgcgcttggtgtta
gcagaaaatggcattcaaggtgataactcaacgggttacgagttactcgaccaagagcaa
ccgttaggtacaagtcaatttatggaagcaacgcgctacaagcgcggcatagaaggtgaa
ttggctcgaactattgccagcataaattcggtacgcggtgcacgtgtacacctagcaatt
ccaaagcgctctgtatttgtaggggatggtcgcaagcctagcgcgtcggtatttttagat
ttatacccaggcaggcccatcaaaccaaaacaaattcaaggtattgctaatttggtagct
agcagtattccagagttgcaagtagagaatgttaccgttgtagatcaaaagggcaaccta
cttactacaggtattgcagaagacaaagacttacttattgccgggcaacatttggaatat
acgcaaaaagtagaagacggcatgataatgcgcgtacgtcgtttgctgtcgccaatatta
ggcgatcagaactttaaaaccgaagttgcagccgatattgattttactgaaatagaacaa
gccgaagaagtatttaaccccgacttacccgctgtgcgcagcgagcaaaccgtcgaagaa
cagcgtattggcagtggcgcgcctggcggcattcctggtgcccttaccaatcaaccaccc
gcagatgggcaggcgccagagcaagctgggcagggcggcgaaggtgcaggtggtcaaccc
agtaatactcgctcgcaggccgtgcgtaattacgagctagatagaacggttagctatacc
aagcgtgagaaaggtcgcttgcgcaggttaacggttgctgtagtaatagacgataaaaaa
acaattaaccccgaaactggcgccgtagagcgcacccagtggacacagcaagaactagaa
cgcttcgctatacttgtaagagatgcagtgggttactctgctgtgcggggtgacagtgtc
aatatactcaacgaagcgtttttacccgagccggccatcgaggtattggacgacctaccg
ttttggcagaacgaaagtattttaaagctaattaaacccatagccggcgcattaattatt
gtagcgttgttggtggggttagtacgcccagtgcttaaaagcttggctgtggcgggagta
aaaacaagagagcaagacgaagcgaaagaaatggccgcattgcaagctgcaggtatggat
ggttttgactcgctttcggatgaaacggttaccctcaccggtggggatgcacttgcacta
cccagcccagaagaagggtacgaacagcagcttaatgctgtgaaggggctagtggcagaa
gatgctggtcgtgtggcacaagtaattaaacgatggataaatgaagaatga
DBGET
integrated database retrieval system
