Saccharophagus degradans: Sde_2379
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Entry
Sde_2379 CDS
T00335
Name
(GenBank) arginyl-tRNA synthetase
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
sde
Saccharophagus degradans
Pathway
sde00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Sde_2379
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sde01007
]
Sde_2379
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sde03016
]
Sde_2379
03029 Mitochondrial biogenesis [BR:
sde03029
]
Sde_2379
Enzymes [BR:
sde01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
Sde_2379
Amino acid related enzymes [BR:
sde01007
]
Aminoacyl-tRNA synthetase
Class I (G)
Sde_2379
Transfer RNA biogenesis [BR:
sde03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Sde_2379
Prokaryotic type
Other AARSs
Sde_2379
Mitochondrial biogenesis [BR:
sde03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Sde_2379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
DUF4015
tRNA-synt_1e
tRNA-synt_1
tRNA-synt_1g
Rhamno_transf
Motif
Other DBs
NCBI-ProteinID:
ABD81639
UniProt:
Q21I40
LinkDB
All DBs
Position
3016801..3018540
Genome browser
AA seq
579 aa
AA seq
DB search
MNIRNLLNDRVKSAMNDAGIPADYSPHLAVSKKAGFGDYQANGAMGAAKALKTNPREVAQ
KIIDNLDLNGIASKVEIAGPGFINIHLDPKWLAQQTVAVTNSTNLGILPKNNPETVVIDY
SSPNLAKEMHVGHLRSTIIGDAIARVLEFTGDKVIRQNHVGDWGTQFGMLIAELEDQLGS
GERPELALQDLEGFYQQAKKHFDDDPAFADRARDYVVKLQSGDAQVNKLWQEFRRVSLLH
AEEIYRKLNVTLGEADVRGESAYNDDLAPVVAELEAQGLAVEDQGAKVVFLHELADKNGD
PSVAIIQKKDGGYLYSTSDLAALRYRVGTLKANRILYFIDARQSLHMQQVFTLARKAGFA
DEWLSTEHHAFGTMLGSDGKPFKTRSGGTVKLAQLLDEAVERAAKEVRTKNPDLTEEEMA
EVASKVGIGAVKYADLCKTRTNDYVFNWESMLAFEGNTGPYMQYAYTRIRSIFRRANENM
DTFESEVNLTEPQEVQLAIKLLQLPEIVEQIAADAYPHVMCNYLYDLASLFMTFYEACPI
LKEGVEPAVKTSRLQLSKGVARTLAQGLDLLGIEVMEKM
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgaatatacgtaacctactaaacgatcgcgttaaaagcgccatgaacgatgcgggtata
cccgccgactacagcccccacttggcggtaagcaaaaaagcgggctttggcgactaccaa
gccaacggcgccatgggtgcggccaaagcgctaaaaaccaacccgcgcgaagtggcgcaa
aagattattgataacttggatttaaacggcatagccagcaaagttgaaattgccggcccc
ggctttattaatatccacttagacccaaagtggttggcgcaacaaactgttgctgtaacc
aatagcaccaacttgggtattctccctaaaaacaacccagaaacggttgttatagattac
tcctcacccaacctcgctaaagaaatgcacgttggccatttgcgctctaccattattggt
gatgccattgcgcgcgttttggaatttacgggcgacaaagttattcgccaaaaccacgtg
ggcgactggggcacccaattcggtatgctaattgccgaattagaagatcaacttggcagc
ggcgagcgccccgagttagcactacaagatttagaaggcttctatcaacaagccaaaaaa
cactttgatgacgacccagcttttgccgatcgcgcccgcgactacgtagtaaagctgcaa
tctggcgacgctcaagtaaataaactatggcaagagtttcgccgagtttcactactacac
gcagaagaaatttaccgcaaacttaacgtaaccctaggcgaagccgatgtacgcggcgaa
agcgcttataacgacgaccttgcaccggtagtagcagagctagaagcacagggcttagca
gtagaagaccaaggtgcaaaagtggtatttttacacgaattagccgataaaaatggcgac
cccagcgttgcgattattcagaaaaaagatggtggctatttgtactccacatccgatctc
gctgcactgcgttaccgtgtaggcacacttaaagctaaccgcattttatattttattgat
gcgcgccaatcgctgcacatgcagcaggtatttacccttgcccgcaaagcaggcttcgcc
gatgaatggctttctaccgagcaccacgcctttggcaccatgctaggcagcgacggtaaa
ccctttaaaacacgcagtggcggcacagtaaaactcgcccaattgttagacgaggccgta
gagcgtgcagcaaaagaagtgcgcaccaaaaacccagaccttaccgaagaagaaatggcc
gaggtagctagcaaagtgggcattggtgcagttaagtacgcagacttatgtaaaacacgc
accaacgactacgtgtttaactgggaaagcatgctcgcatttgaaggcaacacaggccct
tacatgcaatatgcttatacccgaattcgcagcatattccgccgcgcaaacgaaaacatg
gataccttcgaaagcgaagttaacctaaccgagccgcaagaagtgcagttggcaattaag
cttttacagctcccagaaattgttgagcaaatagccgccgacgcttacccacacgtaatg
tgtaattacctttacgatttggccagcttgtttatgacattctacgaagcctgccctatt
cttaaagaaggcgtcgagcccgcagtaaaaaccagccgcctgcaattaagcaaaggcgtt
gcacgcaccttagcgcaagggttggatttactgggtattgaagtgatggaaaaaatgtaa
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