Saccharophagus degradans: Sde_2676
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Entry
Sde_2676 CDS
T00335
Name
(GenBank) Exonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sde
Saccharophagus degradans
Pathway
sde03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Sde_2676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sde03019
]
Sde_2676
03009 Ribosome biogenesis [BR:
sde03009
]
Sde_2676
Messenger RNA biogenesis [BR:
sde03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Sde_2676
Ribosome biogenesis [BR:
sde03009
]
Eukaryotic type
Pre-60S particles
RNases
Sde_2676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ABD81936
UniProt:
Q21H93
LinkDB
All DBs
Position
complement(3395220..3395765)
Genome browser
AA seq
181 aa
AA seq
DB search
MTISDNNLIWIDLEMTGLVPDRDVIIEIATIVTDAQLNVLAEGPMLAIAQPKAVMDGMDE
WNTNQHGKSGLTERVLNSAVSTAMAEQQTIEFLQQWVPAGKSPICGNSIGQDRRFLARYM
PRLEAYFHYRNLDVSTLKELAVRWKPEVLNGFTKKGAHLALDDIKDSIAELKHYREHFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcagcgataacaacctaatttggattgatttagaaatgaccggtctggtaccc
gaccgcgatgtaatcatagaaattgccaccatagtgaccgacgcgcagttaaatgtgctc
gcagaaggcccaatgctagccatagcgcagcccaaagcggtgatggatggtatggatgaa
tggaataccaatcagcacggtaaatcgggtttaacagagcgcgttttaaatagcgctgtt
agcaccgcgatggccgagcaacaaactatcgagtttttgcagcagtgggtgccagcaggt
aaatcgcccatttgcggtaactcgataggtcaagatagacgctttttagcgcgttatatg
ccgcgtttagaggcgtattttcactaccgcaatttagatgtaagtacacttaaagagtta
gctgtacgctggaagcccgaagtgttgaacggctttacaaaaaaaggcgcacacttggcg
ctagacgatattaaagactctattgctgaacttaagcactatcgtgagcattttattaag
ttgtaa
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