Saccharophagus degradans: Sde_2694
Help
Entry
Sde_2694 CDS
T00335
Name
(GenBank) transcription elongation factor GreA / replication restart DNA helicase PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sde
Saccharophagus degradans
Pathway
sde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sde_2694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sde03400
]
Sde_2694
Enzymes [BR:
sde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sde_2694
DNA repair and recombination proteins [BR:
sde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sde_2694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA-like_WH
Zn_ribbon_PriA
AAA_30
AAA_22
SLFN-g3_helicase
T2SSE
Zn_ribbon_6
CFAP95
FAM76
Motif
Other DBs
NCBI-ProteinID:
ABD81954
UniProt:
Q21H75
LinkDB
All DBs
Position
3419376..3421586
Genome browser
AA seq
736 aa
AA seq
DB search
MNKLYLEIALPVPLRRTFDYLTNFQGDPNGLIGCRVQAPFGNQTLIGIIIGVKAQSETPA
DKMKDIHTIIDDTPLISHLDLQLFSWAANYYHHSLGEVLHASIPQKLRQGERQEHEQLIS
AWKHTPEGMGLPETALNRSKKQQEIHRYLLQNTQFTRSTAQRLGFSTSAIKALKDKNLIE
EILVKDSIEQVQTNNSLLNNTPLTLNQEQTAAQESVIFHRFGAYLLDGVTGSGKTEVYLQ
LVARALQAGTQALVLIPEIGLSPQTVGRFKDRFSVEIAELHSSINEAKRAEHWQAAKSGR
AKIVIGTRLAALAALNKPGIIIVDEEHDLSYKQHDGFRYSARDICVYRAKQHNIPVVLGS
ATPSLETLNNAITGRYQHLKLTQRASTATPPHIESIDIRNQQLTAGLCESAIEEIRHTLQ
RQQQALVFLNRRGFAPSLFCHHCGWQAKCTGCELPMTFHSHPRHLHCHRCDRQNGVPRAC
PSCKNQAFSHRGSGTEQIELFLAKQFPNTPVIRIDRDTTSSKKAMQKLLEPAYAGTPCIL
VGTQMLAKGHHIPGINLAVIADADQGLMSADYRGVEQVGQLVTQVAGRAGRASSTGKVLI
QTHQPDHPLMRVLIAEGYNSFAVQLLAERKHSGLPPYGYSALIRSESKRPENALAILQLI
HGAIKNTGNKHTITTIGPMAAPIEKIGNRFRFQYQLFCNSRKELHATLKAVLSEVEVKAE
ARRTRWSVDIDPVTSA
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaataagctctacctagaaatcgccctacccgttcctttgcgccgcacatttgactac
ctcaccaattttcagggtgacccaaatgggctaataggctgtcgcgtacaggcgccgttt
ggcaatcaaaccttaattggcataatcattggggtgaaggcgcagtcggaaactcctgcc
gacaaaatgaaagacattcacaccattattgatgacacaccacttatatctcacctagat
ttgcagctatttagctgggctgccaattactaccaccactctctaggcgaggtattacac
gcgtccatcccccaaaagttgcgccaaggcgaacgccaagagcacgaacaactcataagc
gcgtggaaacacacccccgaagggatgggattgccagaaacagcattaaaccgctctaaa
aagcagcaagaaatacacaggtacctgctacaaaacacacaatttacccgctccacggca
caaaggcttggtttttccacctctgcaataaaagcacttaaagacaaaaatcttatcgaa
gaaattttagttaaagactcgattgaacaagtgcaaacaaataatagcttgctcaacaat
acgccactcaccctaaaccaagagcaaacagccgcacaagaaagcgttatttttcaccgc
tttggggcctacctgcttgatggtgtaacaggcagcggcaaaaccgaagtgtacctacaa
ctggtggccagagccttacaagcaggcacacaagcacttgtacttattcctgaaataggc
ctgtctccccaaacagtaggccgatttaaagacaggtttagcgtagaaatagccgaactc
cattcctccattaacgaagccaaacgcgccgaacattggcaagcagcaaaaagcggccgt
gcaaaaatagtgataggcacgcgcctagctgccttagccgcacttaacaaacccggcatt
atcattgtggatgaagagcacgacctctcatataaacaacacgacggctttcgttattcg
gcgcgagacatatgcgtttaccgagccaaacagcacaacattcccgtggtattaggctct
gcaaccccttcactagaaaccctaaacaacgccattactggtcgctaccaacatttaaaa
ctcacccagcgagcaagcacagccacaccgcctcatatcgaaagtatcgacattcgcaac
cagcaattgacagcaggactgtgtgaatcggcaatagaagaaattaggcacaccctacaa
cgccaacagcaggcgctggtatttcttaatcgcagagggtttgccccgtcgctcttttgt
catcactgcggctggcaagccaaatgtacgggctgcgaactacctatgacctttcactcg
cacccaagacacctacactgccaccgctgcgacaggcaaaacggcgtacctcgcgcctgc
ccaagctgcaaaaaccaagcattcagccatcgcggtagtggtaccgagcaaatcgagctc
tttttggcgaagcagtttccaaatactccagtaatacgtatagatagagacaccaccagc
tctaagaaggcgatgcaaaagctattagagcccgcttacgcaggcacgccttgcatactg
gttggcacacaaatgctagccaaggggcaccatattcccggtattaacctcgctgttatt
gccgatgcagatcaaggccttatgagtgccgattatcgcggtgtagaacaagttggccaa
cttgttactcaagtggccggcagggctgggcgcgcatcgtcaacgggtaaagtacttatc
caaacccaccaaccagaccacccgttaatgcgtgtgcttattgcggaaggctacaatagc
tttgcggtgcaactgctagcagaacgcaaacattccggcctaccaccttacggatactct
gctttaattcgcagcgagtccaagcggcccgaaaacgcgcttgccatattacaactgata
catggcgcgattaaaaatactggcaacaaacacaccatcaccaccatcggcccaatggca
gcccctatagaaaaaataggcaacaggtttaggtttcaataccaacttttctgtaattca
agaaaggagcttcacgcaactttaaaagccgtgctaagcgaggtagaagttaaagcggag
gcgagaagaacgcgctggtcggtggatattgatccggtgaccagcgcttaa
DBGET
integrated database retrieval system
