Saccharophagus degradans: Sde_2706
Help
Entry
Sde_2706 CDS
T00335
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sde03016
]
Sde_2706
Enzymes [BR:
sde01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Sde_2706
Transfer RNA biogenesis [BR:
sde03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Sde_2706
Prokaryotic type
Sde_2706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
ABD81966
UniProt:
Q21H63
LinkDB
All DBs
Position
complement(3433028..3433969)
Genome browser
AA seq
313 aa
AA seq
DB search
MGNRKRPGRPISGVIVIDKPAGDSSNGVLQRVKRLFFANKAGHTGSLDPLATGVLPVCFG
DATKFSQFLLDSDKEYVSTFRFGEVTDTADSDGEVLESIDASKLTKADVLKAIKAYIGDI
DQVPPMYSALKRNGQPLYKLARQGIEVEREPRPVTVYEFELLAFRPGAVAEADVRVFCSK
GTYIRSLASDIGADLELGGHVAKLRRTQAGPFTIDQSITIEELEQERGERLAEVLDHHLL
PTDIAVADFPSLELDDNSAFYFSRGQAVMDSRVYRLGDEGDKVRVFDSSGKFYGVAEITD
EGTVAPKRLVSQS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgggtaatcgtaaaagacctggtcgcccaatatcgggcgtaatagttatagataaaccg
gctggagattcctccaacggcgtattgcaaagggttaaacgcctttttttcgcaaataaa
gcaggccacacaggcagtttagacccgctcgcaacaggggttttaccggtttgttttggc
gatgccaccaaattctcgcagtttttgctcgattccgataaagaatatgtaagcacattt
cgctttggcgaggttaccgataccgccgattcagacggcgaagtgttggaaagcattgat
gcctctaagcttactaaggctgacgtgctcaaagctattaaggcttatattggcgatatc
gatcaggttccccctatgtattctgcgcttaagcgcaacggccagcctttatacaagttg
gcgcgtcagggtatagaggtggagcgagagccacgtccagtaactgtttacgaattcgaa
ttactggcatttagaccgggggcagtagctgaggccgatgtacgggtcttttgcagtaaa
ggtacatacattcgaagcttggcatcggatataggcgcagatttagagcttggcggtcac
gtagctaaattacgccgtacccaagccggcccttttactatcgaccagtcgataactatt
gaagaactagagcaagagcgcggcgaaaggcttgctgaagtgctcgatcatcacttattg
ccaactgatatagcggttgcggatttcccaagtttggaattagacgacaatagtgcgttc
tacttctctagagggcaggcggttatggactctcgggtctatcgcttaggggatgaaggt
gataaagtgcgcgtctttgactccagcggaaagttctatggagtggcggaaatcaccgat
gaaggcaccgtggcgcccaagcgcttagtgagtcaatcgtag
DBGET
integrated database retrieval system
