Saccharophagus degradans: Sde_2804
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Entry
Sde_2804 CDS
T00335
Name
(GenBank) transcriptional regulator, LysR family
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sde03000
]
Sde_2804
Transcription factors [BR:
sde03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Sde_2804
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ABD82061
UniProt:
Q21GW8
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All DBs
Position
3539029..3539970
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AA seq
313 aa
AA seq
DB search
MINYKQLYYFWAVAKHGGITRASEQLHLTPQTISGQLSELEKGFEATLFDRVGRRLELTA
LGKLAYSYADEIFQVGKELENAITKKNNIRERVFRVGISSSVPKSIAYKLLSPALEKDPG
IHLVCKDNNLEHLFADLALHKTDLVIADKPLSSDVGIKGYNHLLGECPIAFYATPALAER
YRPNFPHSLNNAPLLLPGEDSALRIMLQRWLSQQSINPIVKGEFDDTALMKAFAQEGVGI
FPGPTVIDKESQKEHGVEMLGEITELKIRYYAISAERKLRHPSVVAISEAAQQNLFAPHQ
AARNIDMDGHQDI
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgattaactacaagcaactttattatttttgggctgtggcgaaacacgggggcataacc
cgcgcatcggaacagctacatctcaccccacaaaccataagcgggcaattgagtgagctg
gaaaagggttttgaagccacactgtttgatcgcgttggccgcaggcttgaactcaccgcc
ttaggcaaactcgcatactcttacgccgatgagatattccaagtaggcaaagagctggaa
aacgcaattactaaaaaaaataacattcgcgagcgtgtttttagggtgggtatttctagc
tcggtccctaaatctatcgcttacaaactgttgtcgccagccttagagaaagaccccggc
atacaccttgtgtgcaaggacaataacctcgaacacctatttgccgatttagcgcttcac
aaaaccgatttggttattgccgataagcctttgtcctccgacgtaggtattaaaggctat
aaccatttactgggcgaatgccctattgctttttatgccacacctgcactcgctgagcgc
taccgccctaactttccacactctcttaacaacgccccactgctacttcctggcgaagat
agcgccttgcgcattatgttgcagcgctggctatcgcaacagagcatcaaccctatagtt
aaaggtgagtttgacgataccgcattaatgaaggcgtttgcccaggaaggggtgggcata
ttcccaggcccaaccgttatcgacaaggaatcccagaaggagcatggcgtagaaatgcta
ggggagataaccgagttaaaaattcgctactacgcaatttctgccgagcgcaaactacgc
catccctcggttgtggctattagtgaagccgcgcagcagaatttgttcgctccacatcaa
gctgcacggaatatagacatggatggacatcaggatatctaa
DBGET
integrated database retrieval system
