Saccharophagus degradans: Sde_2841
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Entry
Sde_2841 CDS
T00335
Name
(GenBank) ABC transporter, inner membrane protein
KO
K25151
gliding motility-associated transport system permease protein
K25153
gliding motility-associatede transport system auxiliary component
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sde02000
]
Sde_2841
Transporters [BR:
sde02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Gliding motility-associated transporter
Sde_2841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_transp_aux
DUF7088
ABC2_membrane_2
ABC2_membrane_3
ABC2_membrane_5
CcmB
DUF4350
ABC2_membrane_4
Motif
Other DBs
NCBI-ProteinID:
ABD82098
UniProt:
Q21GT1
LinkDB
All DBs
Position
complement(3588666..3591599)
Genome browser
AA seq
977 aa
AA seq
DB search
MQPNNNASVHSDMLPKGTIMRVAKKEVALFFASPVAYLFLATFAAITLFIFFWGESFFAR
NISDVRPLFEWMPLLLVFLCATLTMRLWSDERRSGTLEYILTQAVPLWHFVVGKFLGCMF
LLAVALVLTLPLPITVAYIGDLDWGPVFAGYIAAILLGAAYLSIGLFASARTDSQIVSLI
SACALSGLLYLVGTSSITSFAGNQFGEWLRLLGTGSRFESITRGVIDMRDLYYYISIAAV
FLVLNTYVLERERWATDGVKPRHKQWVAATALLALNALGANIWLNQINVLRMDVTHGNQY
SISESTKGYLNQLQEPLLVRGYFSAKTHPLLAPLVPQMRDLIKEYQVAGNGKVRIEFVDP
MAEPELEKEANQKFGIQPVPFQVADRYQSSIVSSYFDVLVQYGDEYQVLGFGDLIEVQAR
SESDINVQLRNPEHDLTRAIKKVLHSYQAGGNLFDTVKSNLMFNAYLSADEKLPSQLAEF
KQQVTSVLDSTKAQADGRLKVNVIDPDSNAEIAKRIGDDYGFMPMATSLFSNERFYFYMT
LSNGEQVVQIPIDDMTQASFERNLEAGIKRFATGFTKTVALVTPSNAPASPYMGYGQGGA
RFSRLEAFIGSELNVISEDLSDGAVSGEADILVLAAPKELNEKQVFAVDQFLMKGGTVIA
ATSPFSANLSNRSLAMQKHTSGLEDWLAHYGLSVDDELVLDPQNTAFPVPVSRNVGGFQL
QEIRMLDYPYFVDVRGEGLNGDNLISAELPQLTVPWASPIVVNQEKQNERTITELLRSSN
KSWVSQSLSVVPQVSANGVSGFTPSTQRDSFALGVLSEGRFDSYFAGKNSPLLESKPEAE
TENASQEDTASEAEEAFQFSGVIERSPETARIILVSSNDFLRDEVLQLVSNAQRTEYLNP
LQFAANAVEWSLEDAGLLSIRSRGHFNRTLPAMEQSTQMFWEYFNYGLAAFALALLAFGA
RRARQVKQRQYVKLLAN
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctaataataatgcaagcgtgcactcagacatgttgccaaagggcaccataatg
cgtgtggccaaaaaagaggttgcgttgtttttcgcctcgcccgttgcctatttgtttttg
gcaacatttgccgcaattacattgtttatattcttttggggggagtcgttttttgcgcgc
aatatttccgatgtgcgcccactgtttgaatggatgccgctactgttagtatttttgtgt
gcaaccttaacaatgcgactatggagtgacgaacgtcgcagcggtacccttgaatacata
cttactcaagccgtgccgttatggcattttgttgtaggtaaatttctaggctgtatgttt
ttacttgccgttgcgttagtgttgacattacctctgcctattaccgtagcgtacataggc
gatttagattggggccctgtattcgccggttacatagctgctattttacttggtgcggct
tatttaagtatcggcttgtttgcctctgcccgtaccgatagccaaattgtgagtttaata
agtgcctgtgcgcttagcggtttattatatttggttggcactagcagtattaccagtttt
gccggtaatcagtttggcgaatggttgcgcttattgggtacaggctcgcgcttcgagtct
attactcgcggcgtaattgatatgcgagacttgtattactacatcagtattgctgcggta
tttttagttctgaatacctacgtattagagcgcgaacgctgggctaccgatggggttaaa
ccgcgtcataagcagtgggtggccgccaccgcattgcttgctttaaatgcgctaggggca
aatatttggttgaatcaaataaatgtattgcgcatggatgttacccacggcaaccaatat
tccatctctgaatccactaaggggtatttaaatcaactgcaagaaccgctcttggttcgc
ggttatttcagtgcaaaaactcacccactacttgcgccgttagtgccgcaaatgcgcgac
ttaataaaagaataccaagtagcgggcaatggtaaagttcgcattgaatttgtagacccg
atggccgagccagagttagaaaaagaggctaatcaaaaatttggcattcagccagtgcca
ttccaagtggcagatagataccaatcatccattgtgagttcctattttgatgtgctagta
cagtacggcgacgaatatcaagtactcggctttggcgaccttatagaagtacaagcgcgc
agtgaatctgacattaatgtgcaattgcgtaacccagagcacgatttaacccgcgcaatt
aaaaaggtgctacacagctatcaagctggcggtaatttatttgataccgtaaaaagcaat
ttaatgtttaacgcttacctctctgcagacgagaaactaccgtctcaattggcggagttt
aaacagcaagtaaccagcgtacttgatagcactaaagcgcaggccgatgggcgattaaaa
gtgaatgttatcgacccagatagcaacgccgaaatagccaaacgcattggtgatgattac
ggctttatgcccatggctaccagcctgtttagtaacgagcgtttttatttttatatgacg
ctcagcaacggcgaacaggttgtgcaaatccccattgatgacatgacccaggcaagcttc
gagcgaaacttagaggcaggcataaaacgcttcgctacaggttttaccaaaacggttgcg
ctggttacacctagcaatgcccctgcatcaccctatatgggttacggccaaggtggcgct
cgtttctcgcgcttagaagcatttataggcagcgagttgaatgttattagcgaagactta
tccgatggcgctgtttcgggtgaggcggacattctagtgctggccgcgccaaaagagctg
aatgagaaacaagtgtttgcggtggatcagttcttgatgaaaggcggtacggttatcgct
gcaacctcaccgttttcggctaatttatctaaccgcagtttagctatgcaaaagcatacc
agcggcttagaagattggttagcgcactatggtttaagcgtagatgatgagctagtactc
gacccgcaaaatacggcgttccccgtgcctgttagtcgcaatgtgggtggctttcagctg
caagaaattcgcatgttggattacccctattttgtcgatgtgcgcggcgaagggttaaat
ggcgataatttaattagcgcagagttaccccaactaacagtaccttgggcttcccccatt
gtggtaaaccaagaaaagcaaaacgaacgcacgataaccgaattgctgcgcagttcaaac
aagtcgtgggtatctcaatcgcttagtgttgtgccgcaggttagcgccaatggcgtaagt
ggatttacacccagtacccagcgcgatagcttcgccttgggcgtgctaagcgaagggcgt
ttcgactcctacttcgcgggtaaaaactcgccattgttagagagcaagccagaagctgaa
accgaaaacgcgtcacaagaagatactgctagcgaagcagaagaggcgtttcaatttagc
ggcgttattgaacgctcgcctgaaactgcacgaattattcttgtaagttctaacgacttt
ctacgcgatgaggttttacagttagtaagcaatgcacagcgtaccgagtacctcaacccg
ttacagtttgcagcaaatgctgtggagtggtctttagaagacgcaggcttattaagtatt
cgctcgcgcggccactttaaccgcactctccctgcaatggagcaaagcacacagatgttt
tgggagtactttaactatggcctggccgctttcgcgttagcgctactcgcctttggcgct
cgccgagcacgccaagtaaaacaacgtcaatatgtaaagcttttagctaactaa
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