Saccharophagus degradans: Sde_2860
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Entry
Sde_2860 CDS
T00335
Name
(GenBank) conserved hypothetical protein
Organism
sde
Saccharophagus degradans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
DUF2135
TPR_19
TPR_14
TPR_2
TPR_11
TPR_12
TPR_8
PknG_TPR
DUF2201
TPR_1
ANAPC3
TPR_16
Motif
Other DBs
NCBI-ProteinID:
ABD82117
UniProt:
Q21GR2
LinkDB
All DBs
Position
complement(3618070..3621270)
Genome browser
AA seq
1066 aa
AA seq
DB search
MQVFRSLTLCFILVNIFLTASAFASPTASLLGRWVGFLDGSKIIVQFDEASKGLIEEGQG
ADYEITRYKYKVEGSRIIFIDADDFEEMVVDYALTPDGLSLMPEGDETIELTRMASVKTL
PSILENHEWTVFTIPKVAIHTEITGRNAKTTVELSVTHATDQTYEAMLRFPLPSSATLTA
YALDVEGVMIDSVAVEKARARQVFELIEDENIDPSLVELTNSNELAIEIYPINQGQPRSI
RFTYVESLEADETGRLIYTFPFDKIGGEAELDVKVDLLASNKFPELKRALGEQQDWKKIK
HKHFRGYRYTRQRDAERLEATLPLVLAIATNDKRVDIVEQDDFGDRYWATIMTFSRTNLT
PIENAERVTLYWDTSLSMLESEVQNKAILAELLANVKTKNSKSKPLEVEVVLFANAITGS
QVFAVDEQLTSNVTKYINTVAYDGATNFYPLFSRLAGLDASYSIIFSDFKPQFFNGEFQP
SARPVYCITTTAPTNHSLANRISSASGGLSLSSRLLPVSDLVALIGMRPPKVDVKFEGRG
GSWNADSFIKWNIENKLSLSIVSQVPEIASKVGVSVGNGRYKTLNLNKLPLKQAGIAKFK
WLSAKIDELNAEGPAAKERIVALGVRHRIPTPYTSLLVLEDIEQYVEYGIPPPAQIEYAD
KYDEYRADIADEALSREDIIRALEKQWHSRVQSWQSQERKTKQDIENWKAIETKKLSASL
DDGELEEVVVAGIRASMRTAEDIRRDADEVGGDQSISLSQWKPEAPYYASLNNALDAKAR
YIQYLTWREEYRASFNFYMDAAQVFIQHGEVEQARKILGNVLELGEGDDEAISLAAFNYL
QLEDFDTAIFLFEEVIKLQPYEPSAHLNLAKAQSAKARTTRLQTDFQAAVDTFLYVALGP
WEEDEPLRILALESLNRLLHTTDFKLNVGDLPQSLIAYLPMEIRLSLAWNSRTADIDLWV
EEPTGERVGYSNKQGFSGGAISVDITDGYGPEVYYARYALEGEYKVYVNLYANMSAELTK
PVTLTLTLTATTYYGYEKEDSQTQSMRVEKSGSEIYVGSIKFTPAK
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtgtttcgatcacttaccctctgtttcatcttagttaatatatttctaaccgcg
tctgcatttgcttcgcctactgctagtttattggggcgttgggtcgggtttctagatgga
agtaaaataatcgttcaatttgatgaggcaagcaaaggcctaatagaagaaggccaaggg
gcggactacgaaataacccgatacaaatataaagtagaaggttcgcgtattatttttatc
gacgccgatgattttgaagagatggttgttgattatgctttaacgccagatggtttatcg
ttaatgccggaaggggatgaaaccatcgagcttactcgaatggcgagtgttaaaacgctg
ccttccatattggaaaatcatgagtggaccgtttttactattcccaaggttgctattcat
actgaaattacgggccgtaatgctaaaacaacggtcgaattgtctgttactcatgccacc
gaccaaacctatgaggctatgttgcgcttccctctaccgagtagtgcaacccttaccgcg
tatgctttagatgtggaaggagtaatgatagacagtgttgcggtagaaaaagcacgggcg
cggcaagtgtttgagttgatagaggacgaaaatatagatccttctttagttgagttaacc
aatagcaatgaacttgcaatagaaatttaccctataaaccaagggcaaccgcgcagcatc
cggtttacctatgtagagtcgcttgaagcggatgaaacgggcagacttatatatactttt
ccatttgataagattggcggtgaagccgaattggatgtgaaagttgatctgctagcgtca
aataaattcccagagcttaagcgcgcgcttggtgagcagcaagattggaaaaaaataaag
cataagcattttcgcggctaccgctatacacgccagcgcgatgcagagaggttagaagca
accttgccgctagtacttgccattgccactaacgataagcgtgtagatattgtagagcaa
gatgactttggggatcgctattgggcgaccattatgactttttctcgaacgaaccttacg
cccatagagaatgccgagcgtgtaaccctttattgggatacttcgctatctatgcttgaa
agcgaagtgcaaaacaaggcaatactcgcagaattgcttgcaaacgttaaaaccaaaaat
agcaaaagcaaaccgcttgaagtggaagtggtattgtttgccaacgcaattacaggctcg
caagtatttgcggtagacgaacagctaacctctaacgttacgaaatatataaatactgtt
gcttatgatggagcgactaacttttatcctctgttctctaggttagcaggcttagatgca
tcttactccatcatttttagcgatttcaaaccgcagttctttaatggtgaatttcagcct
tctgctaggccggtgtattgtataaccaccaccgcacccactaaccatagtctggcgaac
agaataagcagcgcttctggaggcttgagtttaagctcaaggctgttacctgtttcggat
ttagttgcgttaattggtatgcgaccaccaaaagtagatgttaaatttgaagggcggggc
ggtagttggaacgctgatagttttataaagtggaatattgaaaataaattgtcgttaagc
atagtttcgcaagtgccagaaatagctagcaaagtgggtgtaagcgtaggtaatggtaga
tataaaacactcaatttaaataagctgccattgaaacaggctggcattgcaaagttcaaa
tggctaagcgctaaaatagacgagcttaatgccgaagggccagcagcaaaagagcgtatt
gttgccttgggtgtacggcacagaattcccacgccctacacctcgctattggtgcttgaa
gacattgagcaatatgtggaatacggcattccaccgcccgcacaaatagaatatgcagat
aaatatgacgagtatcgagcggatatagctgatgaagcgctttcacgggaagatattatt
cgcgctctggaaaagcaatggcacagccgagtacaaagttggcaaagccaagagcgaaaa
actaaacaggatattgaaaactggaaggcaatagaaactaaaaaactgtctgctagcttg
gatgacggtgagcttgaagaggttgttgttgcgggaattcgcgcgtcgatgcgcacagct
gaagatatacgtagagacgcggacgaagttggtggcgaccaaagcattagtttgtcgcaa
tggaaacccgaggccccgtattacgcatcattaaataatgcgttggatgcgaaagcgaga
tatatacaatatttgacgtggagagaagagtatcgtgcctcgtttaacttttatatggat
gccgcccaggtgtttatccagcacggtgaggttgagcaagcaagaaaaattcttggcaat
gtgcttgaacttggtgagggggatgatgaggcaataagcctagctgcgtttaactattta
cagttagaagactttgatacagcaatattcctgtttgaagaggtgattaaattacagccc
tatgagccttctgcacacttgaatttagccaaggcacaatctgcaaaagcgcgtaccact
aggttgcaaacggattttcaagccgcagttgataccttcttatatgttgctttgggcccc
tgggaagaggatgaaccattacgtattctcgcattagagtcgttgaataggctgttacat
accaccgactttaaactaaatgttggtgatttacctcaatctctaattgcgtatttacct
atggagataaggctctcgcttgcatggaattcgcgtacggcagatatagacctatgggtg
gaagagccgacaggtgagcgagtaggctacagtaataagcaaggttttagcggcggtgca
attagcgtagatattacagatggctatggtcctgaggtttattatgcgcgctacgcactt
gagggtgaatacaaggtgtatgtcaatctctatgcaaatatgtcggcagagctaaccaaa
ccggtcacgttaacgttaacgttaacggccactacctattacgggtatgaaaaagaagat
tcgcaaacgcaaagtatgcgcgtagaaaaatccggtagtgaaatttatgtggggtcgatt
aaatttacgcccgctaagtaa
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