Saccharophagus degradans: Sde_2875
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Entry
Sde_2875 CDS
T00335
Name
(GenBank) transcriptional regulator, LysR family
KO
K21900
LysR family transcriptional regulator, transcriptional activator of the cysJI operon
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sde03000
]
Sde_2875
Transcription factors [BR:
sde03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Sde_2875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_24
PBP_like
HTH_30
HTH_5
HTH_20
Fe_dep_repress
MarR_2
Motif
Other DBs
NCBI-ProteinID:
ABD82132
UniProt:
Q21GP7
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Position
complement(3642567..3643436)
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AA seq
289 aa
AA seq
DB search
MINVLWLRSFCTLVEVGHFTRTAERLNMTQSGVSQHVRKLEEQLGVPLLVRHGKQFSLSS
AGEKLYAGAQDIMQALVSLERNVGEDPPFEGLVRVISPGSVGLKLYPHLLALQKTHPKLI
IDYRFAPNADVEAAITNATADIGFMTSKSSAADVRCAPIAEESLLLVTPKTATEPDWHTL
MGLGFIDHPDGAHHANLLLGANFPEFAHVNQFPKKGFSNQIGLILEPVSMGLGFTVLPAH
AVEAFAKPELISVHSLVNTAKETLYLCGLRHRSFRQRMETVIAEAKNWL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgataaatgttctttggttacgtagtttttgtacgcttgtggaagtagggcatttcacc
cgcactgcagagcgcctaaatatgacgcaatcgggcgtgagtcagcatgtgcgcaagctg
gaggagcagcttggtgtgcctttgttggtgcggcatggcaagcaatttagcttatcgtcg
gcaggcgaaaagctatacgccggcgcgcaagatattatgcaggcgctggtaagcttggag
cggaatgtaggtgaagacccgccttttgaagggctggtacgggtaatttcgcctggcagt
gtggggcttaagctatacccacacttactggcgctacaaaaaacgcaccccaagctgatt
atcgactaccgctttgccccaaatgcagatgttgaagccgcaataaccaatgcgacggca
gatattggtttcatgacatccaaatcgagtgcggccgatgtgcgttgcgcacctatagcc
gaagagagtttgttactggttacacccaagactgcaacagagcccgactggcatacatta
atggggttggggtttattgatcacccagatggagcgcatcacgcgaacttgttactaggc
gctaatttccctgagtttgctcatgttaaccaattccctaaaaagggcttctctaatcaa
ataggcttaatcttagagccggtaagtatgggcttgggctttaccgtgctgcccgcacat
gcggtagaggcatttgctaagcccgaattaattagcgtgcactcgctggttaacacggca
aaagaaacgttgtacctgtgtggtcttcgccaccgatcgtttcgccaacgcatggaaacc
gtaattgctgaagctaaaaattggctttaa
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