Saccharophagus degradans: Sde_2967
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Entry
Sde_2967 CDS
T00335
Name
(GenBank) ornithine decarboxylase
KO
K01584
arginine decarboxylase [EC:
4.1.1.19
]
Organism
sde
Saccharophagus degradans
Pathway
sde00330
Arginine and proline metabolism
sde01100
Metabolic pathways
sde01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Sde_2967
Enzymes [BR:
sde01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
Sde_2967
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ABD82224
UniProt:
Q21GF5
LinkDB
All DBs
Position
complement(3769240..3771513)
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AA seq
757 aa
AA seq
DB search
MIGTKDMKFRFPIVVIDEDFRAENISGSSIRDLAEAIGNEGMEVVGFTSYVDLTSFAQQA
SRASCFIVSIDDDEFGSGSPEEVAVPIEALRSFILAVRKRNTDIPIFLYGETRTAQHIPN
DVLRELHGFIHMFEDTPEFVARHIIREAKKYLSSLAPPFFNALMEYASDSSYSWHCPGHS
GGVAFLKSPIGQMFHQFFGENMLRADVCNSVDELGQLLDHTGPVAASEQNAARIFNSDHL
FFVTNGTSTSNKIVWHSTVAPGDIVVVDRNCHKSILHSIIMTGAIPVFLMPTRNHYGIIG
PIPKSEFTMESIREKIEANPFARKAKNKKPRILTITQSTYDGILYNVEQIKEILGSNIDT
LHFDEAWLPHATFHDFYKNMHAIGTDRPRSDDTLVFATQSTHKLLAGLSQASQILVQNGN
NRKLDTHRFNESYLMHSSTSPQYSIIASCDVAAAMMEAPGGTALVEESLLEALDFRRAMR
KVDAEFGDDDWWFQVWGPKDIAEEGIGEREDWVIREDDDWHDFGNIESGFNMLDPIKATI
ITPGLNLKGDFDEFGIPAAIVSKYLAEHGIIIEKTGLYSFFIMFTIGITKGRWNSMVTEL
QQFKDDYDQNLPLWRVLPEFVSKHKQYERIGLRDLCTQIHDMYKKYDVAKITTDMYLSKI
EPAMTPADAWAKMAHREIERVSIDEIEGRITAMLVTPYPPGIPLMVPGERFNSTIISYLK
FARDFNSALPGFETDVHGLVKDTVNGVEGYYIDVVKE
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgataggaacaaaagatatgaaatttcgttttcccattgtcgtcatcgatgaagatttt
agggccgaaaatatctctggctcgagtattcgcgatctagccgaagcaattggtaacgaa
gggatggaagttgtaggctttaccagctatgtagacctcacctcctttgctcagcaagca
agccgtgcatcgtgttttattgtttctatcgacgacgatgagttcggctcgggttcaccc
gaagaagtggccgtacctattgaggcgttgcgaagctttatattagcggttagaaagcgc
aataccgatattcctatcttcctatacggtgaaacccgcactgcgcagcatatccccaat
gatgtattgcgcgagctacacggctttattcacatgtttgaagacacgcccgagtttgtg
gcgcgccatattatccgtgaggcgaaaaagtatttgtcgtcactcgcgccaccatttttt
aatgcccttatggagtacgcaagcgatagctcatactcgtggcattgccctgggcactct
ggtggcgtagcgtttttaaaaagccccattggccaaatgttccaccagttttttggcgag
aacatgctgcgcgcagacgtgtgcaactcggtagatgagctaggtcagctgctggatcac
accggcccagttgccgcgagcgagcaaaatgccgcccgtatatttaacagtgaccatttg
ttttttgtgactaacggtacttctacatccaacaaaatcgtgtggcactccaccgtagcg
cctggcgacattgtggtagtagatagaaactgccacaaatcgattttgcactccattatt
atgaccggcgccatccctgtgtttttaatgcctacgcgcaaccactacggcattattggt
cctattccaaagtctgaatttactatggaatctatccgcgaaaagatagaagccaacccg
tttgcgcgtaaagccaaaaacaaaaagccccgtatcctcactattacgcaaagtacctac
gacggtattttgtataacgtggagcaaatcaaagagattcttggctccaatatcgacaca
ttgcatttcgacgaagcttggttgccccatgctacgttccacgacttttataaaaacatg
cacgccataggcacagaccggccgcgttcggacgacaccttagtattcgccacacaatct
acccataaactgcttgctggcttatcgcaggcgtcgcaaatattggtgcaaaacggcaac
aaccgtaaattggacactcaccgttttaacgaatcctacttaatgcattcttccaccagc
ccgcaatattccattattgcctcgtgcgatgtggctgcagccatgatggaggcccccggc
ggtaccgcgctagtagaagaatcgctgctagaagcgctcgatttccgccgtgccatgcgc
aaagtagatgcagagtttggtgatgatgactggtggttccaagtttgggggcctaaggat
attgccgaagagggcattggcgagcgcgaagattgggttatacgcgaagatgatgactgg
cacgatttcggcaatattgaatctggctttaatatgctcgaccccatcaaagccactatc
atcacccccgggctaaacttgaagggcgacttcgatgagtttggtattccggctgcaatt
gtaagtaaatacttggctgagcacggcattatcatcgaaaaaaccggcctgtattccttc
ttcattatgttcactatcggcattaccaaaggccgatggaattccatggtgacggaattg
cagcaatttaaagacgattacgaccaaaacctgcctttatggcgtgttttaccggagttc
gtgagtaaacacaaacagtatgagcgcattggtttgcgcgatttgtgtacccaaattcac
gatatgtataaaaagtacgacgtggctaaaattaccactgatatgtacctatctaaaata
gagcctgctatgaccccagcagatgcttgggcaaaaatggctcaccgcgaaatagagcgc
gtatctattgatgaaatagaaggccgtattactgcgatgttagtaaccccttacccaccg
ggtatacctttgatggtgccgggcgagcgattcaacagcactattattagctacttgaag
ttcgcgcgcgatttcaactctgcgttaccgggctttgagacagacgtacacggtctagtg
aaagacaccgtaaacggggtagaaggctactatatcgatgtagttaaagagtaa
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