Saccharophagus degradans: Sde_2993
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Entry
Sde_2993 CDS
T00335
Symbol
gly5K
Name
(GenBank) putative retaining b-glycosidase
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
sde
Saccharophagus degradans
Pathway
sde00500
Starch and sucrose metabolism
sde01100
Metabolic pathways
sde02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Sde_2993 (gly5K)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sde_2993 (gly5K)
Enzymes [BR:
sde01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
Sde_2993 (gly5K)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_6
Cellulase
RicinB_lectin_2
CBM_35_2
Ricin_B_lectin
CBM_35
DUF6805
CBM60
DUF7383
Big_3_5
Motif
Other DBs
NCBI-ProteinID:
ABD82250
UniProt:
Q21GC9
LinkDB
All DBs
Position
complement(3808643..3811234)
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AA seq
863 aa
AA seq
DB search
MKQSHHNTKGKLGLGRALLCGLMLSVMLGSSAHAQFVHTDGTRILDENGEELNFNGINLG
NWLLWEGYLMMGDFNYRTHTQFLNSLTDAFGSAAKAAEFEHQWRLNYVDEQAIADLSALG
FNSVRVPFHYNMFWENGQLSNHGFQYFDRVIEWCRTYNMYVLLDMHAAPGYQNPGDHADN
VDSNASQPRDTVKFWDGNNVQIAATVWRHIANRYKDEPVVWGYDLINEPVPQPTREFELL
SSMVTMRNAIREVDNNHTIVVEGSWWSSDLTKIDWTDPEVQAASGVYSQWDDNLVYQLHH
YGPLSDTVGRDAITDNLNIPLIIGEYGETDNGNLAAMTDWAKQNLSGYFPWSFKKMSHDK
TLWTIPPNAAYNQVKAYINNGGTPPTHLYADMIAFAQNNVRNGHSSHQWHQGFYDAINPG
NTPPPPPPPPPPAPTCDDSNAQTFTLPSRVQAEDHCASSGIQQESTGDIDGNQNIGWIDA
GDWAEYNVTLNTAGEYTFAARVAANANAGTINVAVNGSQVGSLTAPVTGDWQVYQTTQIT
VNLPAGEHVLRLNFASAGMNVNWFEVSEGQAPPPPPPVNPCDGFMQNLPSKVEAEDYCDM
NGLQTEATSDSGGGENIGWIDAGDWADYGINVDTNTHFILKLRVASQNGGGKVNINVDGA
NVGGFDVSSTGGWQNWQTLSMPLTLSAGNHVLRLDFLAGGLNVNWVEFTPATTTPPTEPP
ATGELEEGTYYITNEASGKALDVSGVSTSNGANVHQWAYGGGLNQQWNAQHVSGNTFELV
SLNSGSCLDADSGSDNAHQWACEGNTNQQWVIEEQSDGSYLIRTKAGNEVLEVQNGSANN
GANVRTAGAANSDRQKWRFNIVQ
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaatcacaccacaataccaagggtaagcttggtctaggcagggcgctgttgtgc
ggcctaatgcttagtgtcatgttgggctcttctgcccacgcacaatttgttcacacagac
ggaaccagaattcttgatgaaaacggagaagagctaaactttaacggcatcaacctaggt
aactggttgttatgggaaggttacctgatgatgggcgattttaattatcgcactcacacc
cagtttttaaattcacttaccgatgctttcggtagcgccgctaaagctgcagagtttgag
caccaatggcgattgaattatgtagatgagcaagccatcgccgatttaagcgcgcttggc
tttaactcggtacgtgtgccatttcattacaatatgttttgggaaaatggccagttaagc
aatcacggttttcaatatttcgatcgcgtaattgagtggtgtcgcacttacaatatgtat
gtgttgctggacatgcacgcagcgccggggtaccaaaaccctggggatcacgcagacaat
gtcgattcgaatgcgagccagccgcgcgatacggtaaaattttgggatggcaataatgta
caaattgccgctaccgtttggcgtcatattgctaaccgctataaagatgagcctgtagtt
tggggttacgatttaattaacgagccagtaccgcagccaactcgcgagtttgaattgctt
agctctatggtaacaatgcgcaacgccattcgcgaagttgataataaccataccattgtg
gttgaaggtagctggtggagttccgatctaactaaaatagattggactgacccagaagta
caagcggcttccggagtttattcccagtgggatgacaacttggtgtatcagctgcatcac
tacgggccgctatctgacactgtgggtcgagatgcgattaccgacaacctcaatatcccg
cttattattggtgagtacggcgaaaccgacaacggtaacttagcggcaatgaccgattgg
gctaagcaaaatttgtcggggtattttccttggtcgttcaaaaaaatgtcgcacgacaaa
accctttggacgattccaccaaacgcggcctacaatcaagtaaaagcctatataaataat
ggtggtacaccgccaacgcatttgtacgctgatatgattgcgtttgcacaaaataatgtg
cgcaatggtcatagcagtcatcaatggcaccaaggtttttacgatgcaattaacccgggc
aatacgccaccaccaccgcctccgcccccaccacccgcaccaacgtgtgatgacagtaac
gcgcagacattcactttgcccagccgcgttcaagctgaagatcactgcgcaagcagtggt
attcaacaagaaagcaccggcgatattgatggcaaccaaaacattggctggatagatgca
ggcgattgggccgaatacaacgttacgctaaatacagcaggtgagtacacttttgcagcg
cgggttgcggcgaatgctaatgctggcaccatcaacgtagcggtaaatggcagccaagtt
ggcagcctcactgcgccagtaaccggcgattggcaggtgtaccaaaccacgcaaattact
gtcaatcttcctgctggtgagcatgttttacgcttaaattttgctagcgcgggcatgaat
gtaaattggtttgaagtgagtgaaggtcaagcgccaccccctccaccccctgtaaaccca
tgtgacggttttatgcaaaatctacctagtaaagtagaggcagaagattactgcgatatg
aatggtttacaaaccgaagcgacaagtgattccggcggcggtgaaaacatcggttggata
gacgcaggtgattgggcggactacggcattaatgtagatacaaacactcactttattctt
aagttacgtgttgccagtcaaaacggtggcggcaaggtaaacataaatgtagatggcgct
aacgttggtggctttgatgtgtcgagcaccggcggctggcaaaactggcaaacactttct
atgccgttaacgttaagtgcaggtaaccatgtattacggttagattttcttgccggtggt
ttaaatgttaactgggttgagtttacacctgctacaaccacgccacctaccgagccgcct
gccacgggcgaattagaggaaggtacttactacattactaacgaagcctctggtaaagcg
ttagatgtgtctggtgtgtctactagcaacggtgccaatgttcatcaatgggcatatggc
ggcggtttaaatcagcagtggaatgcacagcacgtaagtggcaatacgtttgagttggta
agtctaaacagtggttcttgtttggatgccgacagcgggagcgataacgcacatcagtgg
gcttgcgaaggcaacactaaccagcagtgggttattgaagagcaatcagatggcagctac
ttaattcgtaccaaagccggcaacgaagtattagaagtgcaaaatggcagcgctaataac
ggtgctaatgtacgtactgccggtgcagccaatagcgatcgtcaaaaatggcgttttaac
attgttcagtaa
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