Saccharophagus degradans: Sde_3030
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Entry
Sde_3030 CDS
T00335
Name
(GenBank) TonB-dependent receptor
KO
K16087
hemoglobin/transferrin/lactoferrin receptor protein
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sde02000
]
Sde_3030
Transporters [BR:
sde02000
]
Other transporters
Pores ion channels [TC:
1
]
Sde_3030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
ABD82287
UniProt:
Q21G92
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All DBs
Position
complement(3869272..3871353)
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AA seq
693 aa
AA seq
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MTISKPAGKHLFLPSALALAVSVQVQAENDLIEEINVWGTQVIASSVKMDVESIELKQAD
HISDLLRGIPGVDVGGAHSLNQRISIRSMDDKDLRITIDGANQNTYMYHHMGNLQIHADI
LQSVDIKVGNNSVVDGGLGGTVRFKTKDAKDLLAAGQDFGGRVQASYANNASMGAAVTGY
GQLSESVDALVYYNTINRDNYTVGGGKILDADGVEVGNTDGEVRGLEGTLTDLLVKFGWD
LSENQRFKIGYEAYKDKGDYSYRPDMGLATDWAISESLGLPLTFDTEFTRDTITLNYDVT
LGDSEVSVAAFTNESKLWRDESANQAIWPEDPALVEGEATNTGFNILAVSPVGSAQTLTY
GVDIINYDTAYRTDGSLQSEESAQNLALFIEDRIELGDFSIIPGVRYNSFDIDSTVVDDS
FSKVTAALALEYQVSNSLVTSLSTTQLFKGPEIGEVFIGAGLYETANPGIEAEGGLNTEL
AISFEDEVLGADAFSTGITFFNTRITNYIYDYATPPAEVGGRSWKDNVGTMNLKGFEAYV
GYDVGNLTTLLVFSKAQSDLDANEQYASLDGARQDRQRGNPISLSIDYDLPSINALLHWD
VQHLGAVDGDLALDSATLNNDKDGYTVHNMSARWQPETVDGLTVTFGIDNVFDEFYASQS
SRTGTSNHPRFGQLYLLDYEPGRNVKLTVGYQF
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgaccatttcaaaaccagcgggtaagcatttgtttctacccagtgcgcttgcgctagcc
gtttctgtacaggttcaagcagaaaacgatctaattgaagaaataaacgtttggggcaca
caggttatcgcttcatcggtaaaaatggatgtggaatccatcgagctaaagcaggcggat
catattagtgacctgctgcgcggcattcctggcgtggatgtgggcggtgctcactcatta
aaccagcgtatatccatccgcagtatggatgacaaagacttgcgtatcaccatcgacggc
gcaaaccaaaatacatacatgtatcaccacatgggcaacttacaaattcacgccgacatt
ttacagtcggtggatattaaagttggtaacaactcggtggtagatggcggcttaggcggt
acagtgcgctttaaaacaaaagacgccaaagacctgctcgcagcagggcaagattttggt
ggccgcgtgcaggcaagctatgccaataatgcctctatgggtgcggcggtaacaggctat
ggccagcttagcgagagtgttgatgcattggtgtattacaacacaattaaccgcgacaac
tacaccgtaggtggtggcaaaattttagatgccgatggtgtagaagtgggcaataccgat
ggtgaagtacgcggcttagagggcacgcttacagatttattggttaagttcggttgggat
ctttctgaaaaccaacgttttaaaattggttacgaagcctataaagataaaggcgattac
agctaccgccccgatatgggccttgcaaccgattgggcaattagtgagagccttggcttg
ccgctaaccttcgataccgagtttacccgcgataccattacccttaactacgacgtaaca
ctgggcgatagcgaagtgagcgtggcggcgtttaccaacgaaagtaagttgtggcgcgat
gaaagtgccaatcaggcaatctggccagaagaccctgcattagtagaaggtgaagcaacc
aacacaggctttaatattttggctgtttcgccggtaggcagtgctcaaacccttacctac
ggcgtagacataatcaattacgatacggcttaccgtaccgatggcagcctgcaaagtgaa
gaaagcgctcaaaacctagcgctattcatagaagacagaattgagttgggcgacttcagt
attattcctggtgtgcgttacaacagcttcgatattgactctactgtagtagacgatagc
ttctctaaagttaccgcagcgcttgcattggaataccaagtttcaaatagccttgtaacc
agcttaagcacaacacaactgtttaaaggcccagaaataggcgaagtgtttattggtgct
ggcctgtatgaaactgcaaacccaggtattgaagccgaaggtggcttaaataccgagctt
gctatttcgtttgaagatgaagtgctaggtgctgatgcgttctctacaggtattaccttc
tttaatacgcgtattaccaactacatttacgattacgcaacaccgccagccgaagtgggc
ggccgctcgtggaaagataacgtaggcaccatgaacttaaaaggtttcgaagcctatgtt
ggttacgatgtaggtaacttaacaacattgcttgtattctctaaagcgcaaagtgactta
gatgcaaacgagcaatacgcaagtttagatggcgcccgtcaagatcgtcagcgcggcaac
ccaattagcttaagcattgattacgacttaccttctattaacgcgctattacattgggac
gttcaacaccttggtgctgttgatggcgatttagcgttagattctgcaacactaaacaac
gataaagacggctacacagtgcacaatatgtctgcgcgctggcagcccgaaaccgttgat
ggcttaaccgtaacgtttggtatagataacgtgtttgacgagttctacgcatcgcaatct
tcgcgtacaggcaccagtaaccatccgcgcttcgggcagctttacctcttggattacgag
ccaggtcgtaacgttaaattaactgttggttatcagttttaa
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