Saccharophagus degradans: Sde_3052
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Entry
Sde_3052 CDS
T00335
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sde02000
]
Sde_3052
Transporters [BR:
sde02000
]
Other transporters
Pores ion channels [TC:
1
]
Sde_3052
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
ABD82309
UniProt:
Q21G70
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All DBs
Position
3902677..3905421
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AA seq
914 aa
AA seq
DB search
MRNHYTFKIKPIAIAIGIAGGSSTTVLAQNNSLEEVVVTGIRASLQQAVDIKREANGVVD
AISAEDIGKFPDTNLAESLQRITGVSIDRSGGEGRQVSVRGMGPSFNLVLLNGRQMPSKE
SGRAFNFDEVAAEMVSGVEVYKTSSAAVQSGGIGATINIKTARPLDIGDKMAGSVKLSSD
LDAGGTTPQASGLFSKNLDDSFGILLAASYQQRESQEDQLRVTKWNVDPDVSGVANFDNS
ANTNNHIFVPQQSAFNRRQDTRTRINGNLVLQYAPSDTLTATADLQYSDFKIDRYAEELA
LWFSQNTAQSIVTDKNGTVVAYDQGASTIDFFTKAPTSRTVNTSASLNVDWAITDAAKLS
VEHSASTSESNPDGEYNINQSDVQIAQNWGFAVSGDLAFPVFNSDATATPSVQDPSRLRT
WVNELYSNNYKDEINQTRADFTFDDGGSTTLAAGVMFTDQTKTISNISNNLSWDDFAWDT
ASGYGQQDVNDADYTWVALDSGFMDQFSGSADLRALNLGNYSFDPNAVRAAWLADAGAPA
DHFEPTFQNSSFIINEKTTAAYFELTTATDFAGKDLTLVAGARYESTAIDSTGVEASLTL
LTFTDPEENMTTTFSAEDFFTASAGYDVLLPNMSAKLALNDDMVVRVAASRSLTRPSLDK
MTPVRTIATTRPGLLAGSAGSPDLKPFIADNFDLSLEWYLNEVDYISAGFFLKNVNNFIV
DGVLTETINGVTDPSTGTDPEGPDAADQLAEFEITRPVNGEDAQLHGFELAGQHAFGDTG
FGTIANLTLVYTDSDYNVDDVKQTFAVTGLSHSANLVGYYEKGPFQARIAYNWRDEFLQR
FGQTSQATTEPTIVDAYSQIDLSASYDISDNVSVFMEGINITDQGNRSHGRYANQLVEAT
TSGPRYAVGVRAQF
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatcactatacatttaaaataaagcccatagctatcgccatcggtattgctggc
ggcagctctactactgtgctcgcgcaaaacaattcgttagaggaagttgtcgttacgggt
atacgcgcatcactacaacaagcagtagatattaagcgtgaagctaacggcgttgtggat
gcaatttccgcagaagacataggcaagtttccagatacaaaccttgcggaatctctacag
cgtataaccggtgtatctatcgaccgcagcggtggtgaaggtcgccaagtaagcgtgcgc
ggcatggggccaagtttcaacttggtgcttttaaacggtcgccaaatgccaagtaaagaa
agtggccgtgcgtttaacttcgacgaagtagcggccgaaatggtgagtggcgttgaggta
tataaaacatcgtccgctgcggtgcaatctggcggcataggtgccaccattaatattaaa
actgcgcgcccactggatattggcgacaaaatggcgggcagcgtaaagttatctagcgat
ttagatgcgggcggcaccacaccacaagcctctggtttgttcagcaaaaacctagatgac
tcttttggcattttacttgccgctagctatcagcagcgcgagtcgcaagaagaccagttg
cgtgtaactaagtggaacgtagacccagacgtatctggcgtagcgaatttcgataattct
gctaacaccaataaccatatatttgtacctcaacaatcggcgtttaaccgcaggcaagat
actcgcacacgcattaacggcaatctagtgttgcaatacgcaccttccgacacgctgacc
gctactgcagatttacaatactccgattttaaaatagatcgctacgcagaagagctggca
ttatggtttagtcaaaatactgcgcaatctatcgttaccgataaaaacggtaccgtcgta
gcctacgatcagggcgctagcaccatcgacttttttaccaaggcacccacctcacgcaca
gttaatacctcagccagcttaaatgtagattgggccataaccgacgccgcaaaattaagc
gtagaacactcggcttcgacgtccgaatccaacccagatggcgagtacaacattaatcaa
tccgacgtacaaatagcacaaaactggggttttgcagtatctggcgatttagccttccca
gtattcaactctgatgcaaccgcgacaccctctgtacaagacccatcgcgcctgcgcact
tgggttaacgagttgtattctaacaattacaaagatgaaattaatcaaacacgtgcagat
ttcacctttgacgacggcggctctacaacgctcgccgctggcgtaatgtttaccgatcaa
accaaaactatctctaacatttctaacaacctttcgtgggatgattttgcctgggatact
gccagtggctacggccaacaagatgtaaacgatgcagactacacatgggtagcactagat
agcgggtttatggatcaatttagcggtagcgcagatttacgtgcattgaacctcggcaat
tattcattcgaccctaacgcagtgcgtgcagcgtggcttgccgatgcgggcgcgcctgca
gaccacttcgagcctacatttcaaaactcatcgtttattattaacgaaaaaaccaccgct
gcttattttgagttaaccactgccaccgattttgcaggcaaagatttaacgttagttgct
ggcgcacgctatgaatccacagcaatagattcaaccggtgtagaggcttcgcttaccctg
cttaccttcaccgacccagaagaaaacatgaccacaacatttagtgctgaggacttcttt
accgcaagcgctggctacgatgtgctcttgccaaacatgtcggccaagttagccttaaac
gacgatatggttgtacgtgttgccgcttcgcgcagcttaacgcgcccatcgctcgacaaa
atgacacccgtgcgcacgattgcaacaacacgcccaggtttacttgctggcagtgccggc
agccccgatttaaaaccctttatagcagataacttcgacctttcgttagagtggtattta
aatgaagtagattatatttctgcggggtttttcttaaaaaacgtaaacaattttattgta
gacggtgtactaaccgaaacaattaacggcgtaacagacccatccaccggcacagaccca
gaaggccctgacgcagcagaccaacttgctgagtttgaaattacacgcccagtcaatggt
gaagatgcacagctgcatggttttgaacttgccggccagcatgcatttggcgataccggt
tttggcactatcgccaacttaaccctagtgtatacagattccgactacaacgtggatgac
gtaaagcaaacatttgcggttaccggtttaagccattcagcgaacttagttggctactac
gagaaaggccccttccaagcgcgtattgcctacaactggcgcgatgagtttttacagcgc
tttggtcaaacctcacaggcaaccaccgagcccactattgtcgacgcctactcgcaaata
gatctttccgccagttacgatatttcagataacgtatctgtatttatggaaggcattaac
ataaccgatcaaggcaatcgctctcacggccgctatgccaaccaattggtagaggcgacc
acttccggcccgcgttatgccgtaggtgtacgcgcacagttctag
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