Saccharophagus degradans: Sde_3124
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Entry
Sde_3124 CDS
T00335
Name
(GenBank) retaining b-glycosidase-like protein
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
sde
Saccharophagus degradans
Pathway
sde01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sde00536
]
Sde_3124
Enzymes [BR:
sde01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
Sde_3124
Glycosaminoglycan binding proteins [BR:
sde00536
]
Heparan sulfate / Heparin
Enzymes
Sde_3124
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-ProteinID:
ABD82381
UniProt:
Q21FZ8
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All DBs
Position
3997733..3999214
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AA seq
493 aa
AA seq
DB search
MLTTTRETLLALFLPKRPLLPRASIYISDTPQPHQIDERYLSFAIDISVLAGGFWWEGSS
VIRKGLGGLRVQPLSLNSKKLDRLVQALGPAYVRVGGSEADKIHYFEDPTNDKDSLVLTK
AMWDSLHAFIQRNNLAFSFTVKYGLFKRQLHGDWQGSEAEKLLRYSLERGYRIDVCELGN
ELNAYWAFHGINAQPGAKKLAQDYSTFRQVLHSFYPNARVLGPGSAFWPKLGETIKPFSN
ITKGFLANLTEDIDIVDWHYYPFQSARSPVRTRSAKPENFIDYKNLDDFKRYSLQLKKWR
DELQPNAQLWTGESGSAQCGGEARCSDRWASCFWWADQLACGALMGQAVMIRQSLIGGEY
GLVDRLTLKPRPDYWLSWIWARLMGKQVFNVTSSDPNLRVYCHSLAEGGQHDGSRCLLLI
NLNKHSVTLDPSIAEKVKAQYELRAKKLTSKRIKINGKKPKLKKGKLKLQDFPLLPSTNV
VRPLTINFWIMEN
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgctaacaactactcgggaaaccctcctcgctttatttttgccaaagcgcccactattg
ccacgtgcaagtatatatataagtgatacaccgcagccccatcaaatagatgagcgctac
cttagctttgcaattgatatttctgtcttagctggcggcttttggtgggaagggtctagt
gttatccgcaaaggattaggcggcttacgagtgcaaccgctgtctctcaactcgaaaaag
ctcgatagacttgtacaggcgttggggcccgcttatgtgcgtgtaggagggtccgaagct
gataaaattcactactttgaagaccccactaacgataaagacagcctagtactaaccaaa
gcaatgtgggacagcctgcacgcatttattcagcgcaataatttagctttctcgttcaca
gttaaatacggcctttttaaacgccagttacacggcgactggcaaggctctgaagccgaa
aaactgttgcgctacagcttggagcgcggctaccgcatagatgtatgcgaattaggtaac
gagctaaatgcgtactgggcgttccatggtattaatgcgcaacctggcgcaaaaaaattg
gctcaagattacagcaccttccgccaagtattacacagcttttaccccaacgcgcgggta
ctagggcccggcagcgccttttggccaaaactaggcgaaaccatcaaacccttttcgaat
attactaaaggtttcttggccaaccttactgaagatatagacatagtcgattggcactac
tacccctttcaaagcgcgcgctcacctgtacgcacacgcagcgccaaacctgaaaatttt
atcgattataaaaacctagacgacttcaagcgctatagcttgcaacttaaaaaatggcgc
gatgaactgcaacccaatgcacaattgtggacaggcgaaagtggctcggcacagtgcggt
ggcgaagcgcgttgctcagaccgctgggcttcgtgtttttggtgggcggatcaattagcc
tgtggcgcgcttatgggccaagcagtaatgattcgccaaagcttaattggtggagagtac
ggtttagtcgatagacttacacttaaacccaggccagattattggcttagctggatttgg
gcgcgtttaatgggcaagcaggtatttaacgttaccagcagcgacccaaacctaagagtt
tactgtcacagccttgcagagggcggccagcacgacggtagccgctgccttttgttaata
aacctaaataaacacagcgttactttagacccaagcattgcagaaaaagttaaagcgcaa
tatgaacttagggcaaaaaaactcaccagcaaacgtattaaaattaacggtaaaaaacct
aagctaaaaaaagggaaactaaaactacaagacttccccctattgccgagcacaaatgtg
gtacgcccactaactataaatttttggataatggaaaattaa
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