| Entry |
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| Name |
(GenBank) Protein of unknown function UPF0011
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| KO |
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| Organism |
sde Saccharophagus degradans
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| Brite |
KEGG Orthology (KO) [BR:sde00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:sde03009]
Sde_3144
Enzymes [BR:sde01000]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
Sde_3144
Ribosome biogenesis [BR:sde03009]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Sde_3144
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(4019497..4020339)
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| AA seq |
280 aa
MQIDNALYIVATPIGNLGDITQRALNILQQADLIAAEDTRHSGRLLQHFNISTRMISYHD
HSDERQVDSIIAKLQAGTSIALISDAGTPLISDPGYGLVKKAREAGVKVVPVPGVSAVIT
AMSAAGLPSDRFSFEGFPPHKSGARKQLFASLARDARTLVFYESPHRIVDCLKDLAAEFG
EDRPLVMARELTKTFETFLSGGVAQVLEQVLADSNQQKGEIVLMVSGYRKPETGDELSPE
AEATMKVLLEELPVKQAATIGAKLTGEKKNKLYQWALDQN |
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| NT seq |
843 nt +upstreamnt +downstreamnt
atgcaaatagataacgcgctgtatattgtggcaacccccataggtaatttgggcgatata
actcaacgggcgctgaatatactacagcaagccgatttaattgccgcagaggatacgcgt
cacagtggtcgcctgctgcaacattttaatatttctacgcgaatgatttcgtaccacgat
cacagtgatgaacgacaagtggactctattatcgctaaattgcaggccggcactagcata
gcgttaatatccgatgccggtacaccgcttatatctgacccaggttacggtttggtaaaa
aaagcccgcgaagctggggtgaaagtggtacctgtgcccggtgtatcggcggttattacc
gcaatgagcgcagccggcttaccttcagaccgtttcagttttgaagggttcccgccccac
aagagtggtgcgcgcaagcaactgtttgccagccttgcacgcgatgcgcgcacattggtg
ttttacgagtcgccacaccgtattgtcgactgcttaaaagacctcgccgccgaatttggc
gaagaccgtccgctggtaatggctcgcgagctcactaaaacctttgaaacattcttaagc
ggcggtgtggcgcaagtgctggagcaagtattagccgactccaaccaacaaaaaggcgaa
atagtattaatggtgagcggctaccgcaaaccggaaaccggcgacgaactatcgcccgaa
gccgaagctactatgaaagtactgctcgaagaattgcccgttaagcaagccgccaccata
ggcgctaaattaacgggcgaaaagaaaaacaagctctatcagtgggcgttagatcaaaat
tga |
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