Saccharophagus degradans: Sde_3265
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Entry
Sde_3265 CDS
T00335
Name
(GenBank) transcriptional regulator, LysR family
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sde03000
]
Sde_3265
Transcription factors [BR:
sde03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Sde_3265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
FilR1_middle
Motif
Other DBs
NCBI-ProteinID:
ABD82520
UniProt:
Q21FK9
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All DBs
Position
4165711..4166601
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AA seq
296 aa
AA seq
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MEQFNWNHLKYFYHVAREGSITKAAERLYVTPQTISSQLALLEDSLGYSLFDRHGKRLKL
NQEGQLVLRYAEDIFKTGRELLAELKNAELSTRRVVSIGILDSIPKILSCQILDRVYSTS
ENIRIVTHETDFEQLLADLALNKLDMILSDRPVPPNVAVKAYSKLLTTSNFTFFATPKRA
RKLRASFPESLNHQHFLMPGERSVQYTHVLSWFSRLDLTPIILGEFDDTELMKMLGQQGR
GIFCAPTIIAKYIQLQYGVKSIGTTDKIQESYYSITPERKIKNPVIELIHDMYKDG
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
gtggaacagttcaactggaaccatttgaaatatttctaccacgtagcccgcgagggcagc
ataaccaaagccgccgaaaggctgtacgttaccccgcaaactatcagctcgcagctcgcc
ctgcttgaggattcacttggctattcactttttgaccgccacggaaaacgcctaaaacta
aaccaagaaggtcaattagttttacgctatgcagaagatatttttaaaacaggtagagaa
ctactagccgaactaaaaaacgcagagctatccacacgccgagtggtatctattggtatt
cttgattcaatccccaaaattttaagctgtcagatattagatagggtatacagtaccagc
gagaatattcgtatcgttacccacgaaaccgattttgaacaactgctagcagatttagca
ttaaataaactcgacatgattttgtccgacaggcccgtaccacctaacgtagcagttaag
gcctatagcaagcttttgaccacatcaaactttacattttttgctacgcctaaacgcgcc
agaaagttacgggccagctttcctgagtctttaaatcatcaacactttttaatgcctggc
gaaagaagtgtgcaatatacgcacgtattgtcttggttttcacgtttagacttaacacct
atcattttgggcgagtttgacgataccgagctaatgaaaatgcttggccagcaaggcaga
ggtattttttgcgcgcccaccattatcgccaaatatattcagctgcagtacggcgtaaaa
tctattggcactacagataaaattcaagagagctactactccattacaccggaaagaaaa
ataaaaaaccctgtaattgaattaattcacgatatgtacaaagatggataa
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