Saccharophagus degradans: Sde_3411
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Entry
Sde_3411 CDS
T00335
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sde
Saccharophagus degradans
Pathway
sde03030
DNA replication
sde03430
Mismatch repair
sde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sde_3411
03430 Mismatch repair
Sde_3411
03440 Homologous recombination
Sde_3411
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sde03032
]
Sde_3411
03400 DNA repair and recombination proteins [BR:
sde03400
]
Sde_3411
Enzymes [BR:
sde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sde_3411
DNA replication proteins [BR:
sde03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Sde_3411
DNA repair and recombination proteins [BR:
sde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Sde_3411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ABD82666
UniProt:
Q21F63
LinkDB
All DBs
Position
complement(4345533..4346180)
Genome browser
AA seq
215 aa
AA seq
DB search
MSALGNKNVPLANSVVVLDFETTGLSPDMGDRAIEIGAVRLHNGEIVDRFQALMNPGFQI
SGFIASYTGIDNSMLAKAPPCDEVMDAFANYIGNDNLVAHNASFDKRFLDAELYRIGRSY
SGDFTCSLLAARRLFPNAENHKLGTLVKHTKLQSDGAFHRALYDSEMTAKVWMVMLMQLQ
QAYGLNHVPFSLIQKITKTPKKSVHGLLEKFVAKQ
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccttggggaataaaaatgtaccattagccaatagcgtagttgtactcgatttt
gaaacaacagggttatctcccgatatgggagatagagcaatagaaataggcgcggtgcgt
ttgcacaatggcgaaattgtcgatcgctttcaggccttgatgaaccccggcttccaaata
tcaggttttattgccagttatacgggtatagataacagcatgctcgccaaagcgccgccg
tgtgatgaggtgatggatgcattcgccaattacattggtaatgataatcttgtggctcat
aacgcttcgttcgataagcgttttttagatgccgagctgtaccgtattggacgcagctat
agtggtgactttacttgttcgctattggccgccaggcgcttatttcccaatgcggaaaac
cataaattgggtacactggtaaaacacaccaagttacaaagcgatggtgcatttcaccgg
gcgctgtacgattctgaaatgacggccaaagtgtggatggttatgttaatgcagttacag
caagcctacggcttaaaccatgtgccgttttcgcttattcaaaaaataactaaaacgcct
aaaaagtcggtgcatggcctgttagaaaaatttgtagcaaagcaataa
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