Saccharophagus degradans: Sde_3629
Help
Entry
Sde_3629 CDS
T00335
Name
(GenBank) response regulator receiver
KO
K06596
chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
Organism
sde
Saccharophagus degradans
Pathway
sde02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sde_3629
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sde01001
]
Sde_3629
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sde02022
]
Sde_3629
02035 Bacterial motility proteins [BR:
sde02035
]
Sde_3629
Protein kinases [BR:
sde01001
]
Histidine kinases
CheA family [OT]
Sde_3629
Two-component system [BR:
sde02022
]
CheA family
ChpA-ChpB/PilGH (chemosensory)
Sde_3629
Bacterial motility proteins [BR:
sde02035
]
Pilus system
Twitching motility proteins
Sde_3629
Chemosensory pili system proteins
Sde_3629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hpt
Response_reg
CheW
HATPase_c
H-kinase_dim
Rhodopsin_N
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
ABD82884
UniProt:
Q21EJ5
LinkDB
All DBs
Position
complement(4601147..4608157)
Genome browser
AA seq
2336 aa
AA seq
DB search
MGDKRNFAALEWVIGEISDTLKDARQALEAYVEDPKDSTRMRFCLTHIHQVHGSLQMVEF
HGASLLAEEMEHTAQAIINNDVASAPEAQEVLMRSMLQLPIYLDHVKIHKEDHPGVVLPL
LNDLRAVRKQSFLSETNLFSPDMSAAERKSVKPHPVTQDAAKLTQVLKKLREMYQFSAAS
VLRGIKIDENLTYIDKVMGRLELLTRGTTCHATWDISAALVDALRRDDLELSVAVRGLLR
FLARELRILGEKAPQSLARKPPVNLLKNLLYYVGKADAGSERVARIRAEYKLDTAEFDSG
YGGVRSDGDGLNAPDPEAIRSVVVALQEELNTVKHILDICLTGQGNPEGLAEVLPVVKRV
GDTLAVLGIGDLRKQIVEQADVLEKMSQQNSLDEDELMQVATRVIDVEHKLDAISKVVGK
SRDINDINEREIEIDQAKATVINECRHGLEKAKDAIVEYISSKWDVAQLENIGGLLHDIR
GGLDMIPLPRPAAIMDACNRYIQEALLSGETQPSWKALDALADAMASVEFYLERLSVDLD
GDADQFLDIAEESVASLGFAVTSRPVVPSQVIETETPVAEGSFAADTQADAVRDQSGQEA
SSQAESAQQEQPAESFDQGAEAAYEAQEPEDNTLDSAFANLPQVEIDEPQESVENEASDV
SAVSDESTADYSEQPSSDNAFGQQDTASYEAPQTEPAGASVEEQQPAQDPADAPISLDMI
SVDDEPVAEEESDIDEEIIEIFIEEAGEVLETLEEYFPKWRADPTDNDSLVIVRRAFHTL
KGSGRMVEAYDVGELAWSVENMLNRIIDKTVPYTAAHGNFIQLVLELTPTLVEAFKNRTA
NPQKALTETYMGYGAALAEGSIPDEVKELAGSDAATDSAAQEEHAQQETEAPPAYYVEED
EDDDEDDRVLKEIFSSEARSHLATIQQFVDEMEAAAPIYTPPTDSLQRALHTLKGSAKMA
QVTLIAEMAEPLENFAKELITYQVPITDDILQLIKDAGSYTAGAIEAVENGREIEVSKLP
QFLARAFELREMAVGHLIRLKEMEKQGVNKVDPRLLSIFMAEEMTLLLEADQLLAQWQSN
PGELERIDDVIRELTTLEQGAQQANLPDMASLSQRLSTVHGHIKQNNLQLDEGFFETLLA
GHNALLDMVDAVAAGQNMVPPQEYVVAAIESLIHSAEANAATRADAPQFDTEQADEFGSE
EIIIEDFSELNELESETEAEQQSELQGEQAEQLNPQDLSEPTSEEAFSFGEAAADASNES
FDLGEQTSETVEFDNAQEEAPTAADQSDTLAFAIDAEDADEISAGDDDYLDLVVEPLLID
EEDSNDLEINFDEESSEEISLEDESTFEDNAFDNVTESPTEQAEETFGSLDNAFDAPTAD
ETFATQELTDEHQLAGELGEHIDVVEVEGLGEPASEAEQTDTVDFELPHGEEAEFKSDVA
AEASEQTQAEECSDSNDSDSSGSDVSDSEFNESDFDELPEPPLEPQEPVAPVAAESTQPS
HPVAEGMATIDGLLDSIDIQDPDYDEDIVEVFLEEADELCEELDEAIHTWESDWSNAEPS
EIIKRALHTLKGGARLSGMNNLGELTHEYESYIIGTDFDSTDEAFFAQLHSYQDKVLRGV
RALHQFMRGDAAQVVASEEPTLGDVELVEEDEAGIAMVKQAQTSEAPATNDGEPGSSNVV
PFAPKTKDESGFIPTRPKEEDSGFVMPHASGGAQAAPQVAMKRSGPQEVVKVPADLLEEL
VNLAGETSISRGRLEQQVNDFGGALEEIDGTIHRLQEQLRRLDIETEAQIIFRQEQIAES
DRNFDPLEMDRYSQLQQLSRSLIESASDLADLRSTLTDKVRDTETLLLQQSRINSTLQEG
LMRSRMVPFSRLVPRLRRIVRQVSSELGKSVTFELDNIEGELDRSVLERMVAPLEHMLRN
AVDHGIEMPDVRANAGKSETGRIVLTLGREGGDVTLRLADDGRGIDLKRVREKAIERGLM
VDDATLSDRDIMQFILHAGFSTAESVTQISGRGVGMDVVHAEIKQLGGSVSINSEWGKGT
EFLVRLPFTVSVNRALMVALGSDYFAVPLNNIEGIVRVSPFELEHYYQNPEARFEYAGEN
YQVRYLGSMLIDGMRAKLDGQSLPLPVLLVRSAEHTMALQVDTLLGSREIVVKSLGQQFS
TVQGLSGATVMGDGSVVVILDPHALVRKEMALATAAIAMTGHEPVQEKEREVQTVMVVDD
SVTVRKVTTRFLEREGFNVITAKDGVDALRVLQDEIPDVMLLDIEMPRMDGFEVAKNIRS
SQRWRDIPIIMITSRTGDKHREHALSLGVNKYLGKPYQEDVLLESIVELIGGDDNQ
NT seq
7011 nt
NT seq
+upstream
nt +downstream
nt
atgggagataaacgaaatttcgcagcgttagaatgggttattggagaaatctccgatacc
cttaaagacgctcgacaagcgcttgaagcctacgtcgaagatccaaaagattcgacgcgg
atgcgcttttgcctgacccatattcaccaagtgcatggcagcttgcagatggtggagttt
cacggcgcctcactgttagccgaggaaatggagcacactgcacaggccattattaataac
gatgtagccagcgcccctgaagcacaagaagtgcttatgcgctctatgttgcagcttcct
atttatctcgatcacgtaaaaatacacaaagaagatcacccaggtgttgtgctgcctttg
ctgaacgatcttcgcgcggtgcgcaaacaaagcttcttaagcgagaccaacttattctcg
ccagatatgagcgccgccgagcgcaaatctgtaaaaccgcaccctgttactcaagatgca
gccaagcttactcaagtgcttaaaaaactgcgggaaatgtaccagttttctgcagccagt
gtattgcgcggcataaaaatagacgaaaacctcacttacatagataaagtgatgggccgt
ttagagttgttaactcgcggcacaacctgtcacgcaacgtgggatatttccgctgcgcta
gtggatgcgctgcgtcgcgacgatttagagctaagcgttgctgtgcgcggcctattgcgc
tttttggcgcgagagctgcgtattttaggtgaaaaagcgccgcaatctttagcgcgcaag
ccaccggttaacctacttaaaaatttactttactacgttggcaaagccgacgcaggcagc
gagcgcgttgcgcgcattcgcgcagaatataaattagataccgccgaattcgactcgggt
tatggcggcgtgcgcagcgacggcgatggcttaaatgcgccagacccagaagccatccgc
tcggttgtggttgcactgcaagaagaacttaacaccgtaaaacatatcctcgatatctgc
ctcaccggtcaaggtaacccagaaggtttggccgaagtattgcccgttgttaaacgcgtt
ggcgatacgcttgcagtattaggcattggcgatttacgcaagcaaatagtcgagcaggct
gatgtgctcgaaaaaatgtctcagcaaaacagcttagacgaagacgaattaatgcaagtt
gccactcgcgtaatagatgtagagcacaagctcgatgctatttcgaaagtggtgggcaaa
agccgtgatattaacgatatcaacgagcgcgaaatcgaaatcgaccaagctaaggcaacc
gttattaacgagtgtcgccacggcttagaaaaagcgaaagacgcaattgtcgaatacatc
tcgtctaagtgggatgtagcccagctcgaaaatattggtggcttgctacacgatattcgc
ggcggcttagatatgattcctctgccgcgcccagcagcaatcatggatgcctgtaatcgt
tacatccaagaagcactgttaagcggcgaaacacaacctagctggaaagcgcttgatgca
ctggccgacgctatggcgagtgtggagttttatctcgagcgcttatcggtagatttagac
ggcgatgccgatcaatttttagatatagcagaagaaagtgttgcatcacttggctttgct
gtaacgtcacgccctgtagtgccatctcaagttatcgaaactgaaacgcctgttgccgaa
ggtagctttgcggccgatacgcaggcagacgcagtgcgagatcagagcgggcaagaagca
agttcgcaagcagagagcgcgcagcaagaacagcctgcagaaagcttcgaccaaggcgca
gaagctgcttatgaagcacaagagcctgaagacaacaccttagactctgcatttgccaac
ctgccacaggtcgaaatagacgagccgcaagagtctgttgaaaacgaagctagcgatgta
agtgccgtaagcgacgaaagcacagcagactatagcgagcaaccaagcagcgataatgcc
tttggccaacaagataccgctagctacgaagcgcctcaaaccgagccggcaggcgcgagt
gtagaagagcagcaacctgcacaagacccagcggatgcgccaatttcattagatatgatc
tctgtagacgacgagcctgtcgccgaagaagagagtgacatcgatgaagaaattatcgaa
atttttatcgaagaagcgggcgaagttttagaaacattagaagagtacttccccaagtgg
cgtgccgaccctaccgataacgactcactggttattgttcgccgtgccttccacaccctc
aagggcagtggtcgcatggtagaagcctacgatgtaggtgaattggcttggtcggtagaa
aatatgcttaaccgcattatcgacaaaaccgttccctatactgcagcgcacggcaatttt
attcagctggtgctcgagctaacaccaacgctggtagaagcatttaaaaaccgcaccgcc
aacccacaaaaagcgcttaccgaaacctatatggggtacggggcagccttagccgagggg
agtatccccgacgaggtaaaggagttagcgggtagcgacgctgcgacagatagcgcagcg
caagaagagcatgcgcaacaggaaaccgaggcgccacctgcttactatgttgaagaagat
gaagacgacgatgaagacgatcgcgtattaaaagaaattttttcttctgaagcacgctcg
catctagccactattcaacagtttgtggacgaaatggaagctgcggcacccatttatact
ccacctaccgatagcctacagcgcgcactgcacaccttaaaaggcagtgccaaaatggcg
caggtaacgcttattgcagaaatggctgagcctttagaaaactttgctaaagagcttatt
acctatcaagtacctattaccgacgatattttacagctgataaaagatgccggctcttac
accgcgggcgcaatcgaagcggttgaaaatggtcgtgaaatagaagtttctaaattgccg
cagttccttgcgcgtgcgtttgagttgcgcgagatggctgtgggacatttaattcgcctt
aaagaaatggagaagcaaggggtaaacaaagtagacccacgcttgctatctatttttatg
gccgaagaaatgactctgcttttagaagctgatcaactattggcgcaatggcaaagcaac
ccaggtgaactcgagcgcatcgacgatgttattcgcgagctaaccaccctagagcagggc
gcgcagcaagccaacctgccagatatggccagcttaagccagcgcttaagcactgtgcac
ggccatattaaacaaaacaatttacagttagatgaaggctttttcgaaaccttattagcc
gggcacaatgccctactcgatatggtagatgcagttgccgctggccaaaatatggtgccg
ccgcaagaatatgttgtggctgctatagaaagtcttattcacagcgccgaagctaatgct
gcaactagagctgacgcaccacagtttgatactgaacaagccgacgaatttggcagcgaa
gaaattatcatcgaagatttctctgagctaaatgagctggaaagcgaaacagaagccgaa
caacaaagcgaacttcagggcgagcaagcggaacaactaaacccgcaagatttaagcgag
cctaccagtgaagaagcattcagctttggcgaagcggcagctgacgcgagcaacgaaagc
ttcgacctgggtgagcaaacaagcgagaccgttgagttcgacaatgcgcaagaagaagca
cctactgcggctgatcaatcagatacgcttgcatttgcaatcgatgctgaagatgcagat
gaaattagtgcaggtgacgacgactacctcgatcttgttgtcgagcctctgctcatagac
gaagaagactccaacgacttagaaattaattttgatgaagagtcatcagaagaaatttct
ttagaagatgaaagtacgtttgaagacaacgcttttgataacgttacagaatctcctaca
gagcaagcagaagaaacctttggttcgctcgacaatgcttttgatgcgcccactgcagac
gaaacatttgccacccaagaattaaccgacgagcatcaattggccggtgaactgggtgag
catattgatgttgttgaggttgaaggtttaggtgagcccgcaagcgaggcggagcaaaca
gacaccgttgactttgaattgccgcacggcgaagaagccgagttcaaatcagacgttgcc
gccgaagcgagcgaacagacacaagctgaagaatgctctgattctaatgattcagatagt
agtggttcagatgttagcgattcagaatttaatgaatctgattttgatgaattaccagag
ccgccactcgaaccgcaggagccagtagcacctgtagctgcagagtctactcagccgtcg
caccctgttgccgaaggtatggcaacaattgatggcttgctcgatagcattgatatacaa
gacccagactacgatgaggatattgtcgaagtattcctagaagaggccgatgagctttgt
gaagagctagacgaagccattcacacctgggaatccgactggtcgaatgccgagccttca
gaaattattaaacgtgccctgcacaccctgaaaggtggtgcgcgtttgtctggcatgaat
aatttaggtgagcttacccacgaatacgaaagctacataatcggtaccgatttcgattct
accgatgaagctttcttcgcacagttacacagctaccaagataaagtactgcgtggcgtg
cgtgcgttgcaccaatttatgcgcggcgatgcagcgcaggtggtggcatccgaagagcca
accttaggtgatgtagagctagtcgaagaagacgaagctggtatcgccatggtgaaacag
gcgcaaacaagtgaagcacctgctaccaacgacggcgagccgggcagcagtaatgttgta
ccttttgcaccaaaaactaaagatgaatcgggctttattccaaccagacccaaagaagaa
gattctggttttgtaatgcctcacgcgagcggtggtgcacaagctgcgccgcaggttgca
atgaaacgcagcgggccgcaagaagttgtaaaagtacctgcagacctacttgaagaactg
gtaaacctcgcaggtgagacttcgattagccgcggccgactagagcaacaggtaaacgac
tttggtggtgcactcgaagaaatcgacggtactattcaccgcttgcaagaacagctgcgc
cgtttagatattgaaacagaagcgcaaattattttccggcaggagcagattgcagaatct
gatcgcaacttcgatccgctggaaatggaccgctattcacaattgcagcagttgtcgcga
tcgcttatcgaatccgcttcggatttggccgatttgcgctcaacgcttaccgacaaagtg
cgcgatacagaaaccctattgctgcaacagtcgcgtattaactcaacactacaagaaggc
ctcatgcgctcacgcatggtgccattctcgcgccttgtaccgcgcttgcgccgtattgtg
cgtcaagtatctagcgaattaggtaagagtgttaccttcgagttagacaacatagaaggt
gaattggatcggtctgtattggagcgcatggtagcgccgctagagcacatgttgcgcaac
gcggtggaccatggtattgaaatgccagatgtacgcgcgaatgctggtaaatctgaaacc
ggccgcattgtacttacccttggccgcgaagggggcgatgtaaccctgcgcttggccgat
gatggccgcggtatcgatttaaaacgcgtgcgtgaaaaagcgattgagcgcggcttaatg
gtggatgatgccaccctaagtgatcgcgatattatgcagtttattttgcatgctggtttc
agtactgcagaaagcgtgacccaaatttctggtcgcggtgtgggcatggatgttgttcac
gcagaaattaaacagctgggtggttcggtttctattaactccgaatggggtaagggtacc
gagttccttgtgcgcttgccatttaccgtatcggtaaaccgcgcattaatggttgccttg
gggtcggattactttgccgtaccacttaacaatattgaaggtattgtgcgtgtaagccca
ttcgagctagagcactattaccaaaaccccgaagcgcgtttcgaatacgccggcgaaaat
taccaagtgcgttacttgggcagcatgttaattgatggcatgcgggcgaagcttgatggg
caatcgctacctctgcctgtgttattagtgcgctctgccgagcacaccatggcactgcaa
gtagatacgctattaggtagccgcgagattgtggtaaaaagcttagggcagcaatttagt
acggtacagggcttgtcgggcgccacagtaatgggtgacggtagcgttgtagttattctc
gacccacacgcacttgtgcgtaaagaaatggcgttggctacggccgctattgcaatgacc
ggccacgagccagtgcaagagaaagagcgcgaagtacaaacggttatggtagtggatgac
tccgtaacagtacgtaaagtaacgacccgtttcttagagcgcgaaggctttaacgttata
actgcaaaagacggcgtggatgccttgcgcgtactgcaagatgaaatacccgatgtgatg
ttgctagatatcgaaatgccgcgcatggatggcttcgaagtggcgaaaaatattcgcagc
tcacaacgctggcgcgatatccccattattatgattacatcacgtaccggggataaacac
agagagcacgccttaagcttgggtgttaacaagtatctcggtaagccatatcaagaagac
gtactgctcgaaagtattgttgaattgattggcggggacgacaaccaatag
DBGET
integrated database retrieval system
