Saccharophagus degradans: Sde_3696
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Entry
Sde_3696 CDS
T00335
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
sde
Saccharophagus degradans
Pathway
sde03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Sde_3696
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sde03021
]
Sde_3696
03400 DNA repair and recombination proteins [BR:
sde03400
]
Sde_3696
Enzymes [BR:
sde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Sde_3696
Transcription machinery [BR:
sde03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Sde_3696
DNA repair and recombination proteins [BR:
sde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Sde_3696
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF1907
Motif
Other DBs
NCBI-ProteinID:
ABD82951
UniProt:
Q21EC8
LinkDB
All DBs
Position
4681213..4681485
Genome browser
AA seq
90 aa
AA seq
DB search
MARITVEDCLDYVDNRFELVIVGSKRARQIATQGKEPLVAPENDKPTVIALREIELGLID
DAFLAATDAEPVEHFAEPSEENADNLYPEA
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggcacgaattactgtagaagattgtttagattacgttgataaccgctttgaattagtg
attgtaggcagcaaacgtgctcgccaaattgctactcaaggtaaagagccactagtagcg
ccagagaacgataaaccaaccgttatcgctttgcgcgaaattgaattgggcttaatcgac
gatgcgttcctagctgcaactgacgcagaacccgtagaacacttcgcagagccatctgaa
gagaacgcggataacctttaccccgaagcctaa
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