Saccharophagus degradans: Sde_3953
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Entry
Sde_3953 CDS
T00335
Name
(GenBank) transcriptional regulator, AraC family
KO
K13652
AraC family transcriptional regulator
Organism
sde
Saccharophagus degradans
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sde03000
]
Sde_3953
Transcription factors [BR:
sde03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Sde_3953
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GyrI-like
HTH_18
Cass2
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ABD83208
UniProt:
Q21DM1
LinkDB
All DBs
Position
4982375..4983238
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AA seq
287 aa
AA seq
DB search
MNKTLTLAIYRDRILAVVDYIWRNIERDVELNTLADVAHFSPYHFHRIYREMMHETVSTT
VRRLRLHYAACQLLRTNHSVETIATTLGYGSGEAFSRAFSRAYTVTPSAYRQQRSPLPEA
KMALPSRRFYAMKHTVDIEKFNKVELGGLAHQGDYLDIGAVFEKVFVSAGSKQFLNEHSR
SFGIYYDDPTSKDKSALRSHACVTLNPQQVKEAGLDYLTLEAGNHAVLTFTGPYSELEQA
YEWFYGEWLPQSGYQLADRPPFEEYLNDPKTVPPSELLTKIYLPLAE
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaccctaacactagccatttatcgcgaccgtattttagcggtagtagattac
atatggcgcaatattgaacgcgatgtagagctaaacaccttagccgacgttgcgcacttt
tcgccttatcattttcatcgcatctaccgtgaaatgatgcatgaaacggtaagtactact
gttagacgcttgcgattgcactatgccgcctgccaactgctgcgcaccaatcacagcgta
gaaaccattgccactactttagggtatggcagcggtgaggcttttagccgcgcgtttagt
cgcgcctacactgttaccccctcggcctaccgccaacagcgcagccctttacccgaagcc
aagatggctttacccagtaggaggttttacgcaatgaaacacactgtagacattgaaaag
tttaataaagttgaactcggcggcttagcacaccaaggcgactacttggatattggcgct
gttttcgagaaggtatttgtatctgctggcagcaagcaatttttaaatgagcattcgcgc
tcgtttggaatttattacgacgacccaaccagtaaagataaaagcgcactgcgctcgcac
gcttgcgtaacccttaacccgcaacaggtaaaagaagccggcttagactatttaacttta
gaagcgggcaaccatgcagtacttacgtttacggggccctattccgaattagaacaagcc
tatgaatggttttacggtgaatggttaccgcaatcggggtatcaacttgccgaccgccca
ccattcgaagaatacttaaacgaccccaaaactgtgccgcccagtgaattactaacaaaa
atatatttacccctagcagaataa
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