Streptomyces deccanensis: L3078_02095
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Entry
L3078_02095 CDS
T08215
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sdec
Streptomyces deccanensis
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdec03021
]
L3078_02095
Transcription machinery [BR:
sdec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L3078_02095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_Crp_2
HTH_23
KORA
HTH_AsnC-type
HTH_3
DUF7343
MarR_2
HTH_24
Sigma70_ECF
GerE
DUF6757
HTH_31
Motif
Other DBs
NCBI-ProteinID:
ULR48165
LinkDB
All DBs
Position
complement(448011..448850)
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AA seq
279 aa
AA seq
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MLVNASAHATDTTVRPVTPDRRTHDDAPDTASAFARLAAMEEGPERDHVRDELVRAWLPM
AHRIAGRFRNRGESLEDLRQVAAMGLVKAVDRYEPERGAFESYAVPTITGEIKRHFRDRM
WTLRVPRRVQDLRNKVRVARRELSQTSGGAAEPSVADIAALAGLTEEEVHAGMEALDSFS
ALSLDAEMASGDDGYSLADTLGAPDAAYDTVVDRESVKEGLRRLPERERAILYMRFFEDM
TQNRIADRLGISQMHVSRLISRSCARVREEALGRTTPSV
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcaatgcgtccgcacacgccacagacaccaccgtccgtcccgtcacccccgac
aggaggacgcacgacgacgcccccgacaccgcctccgccttcgcccggctcgcggcgatg
gaagagggacccgaacgcgaccacgtccgggacgaactggtccgcgcctggctgcccatg
gcgcaccgcatcgccggccgcttccgcaaccgcggcgagtcgctggaggacctgcgccag
gtcgccgccatgggcctggtcaaggcggtggaccgctacgagcccgaacggggggccttc
gagagctacgccgtgcccaccatcaccggagagatcaagaggcacttccgcgaccggatg
tggacgctccgcgtcccccgtcgggtgcaggacctccgcaacaaggtgcgcgtggcgcgg
cgcgaactcagccagacctccggcggcgccgccgagccctccgtcgccgacatcgccgcc
ctcgcgggcctcacggaggaagaggtccacgccgggatggaggcgctcgacagcttcagc
gccctgtcgctggacgccgagatggcctccggcgacgacggctacagcctcgccgacacc
ctcggcgcccccgacgcggcctacgacaccgtcgtggaccgcgagtcggtgaaggaagga
ctgcgacggctgcccgaacgcgagcgggccatcctctacatgcgcttcttcgaggacatg
acccagaaccgcatcgccgaccgcctcggcatctcccagatgcacgtctcccgcctcatc
agccgcagctgcgcgcgcgtccgcgaagaggccctcggccgcaccacgccctccgtctga
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