Streptomyces deccanensis: L3078_02100
Help
Entry
L3078_02100 CDS
T08215
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sdec
Streptomyces deccanensis
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdec03021
]
L3078_02100
Transcription machinery [BR:
sdec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L3078_02100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
GerE
MarR
HTH_1
HTH_Crp_2
DUF7343
HTH_Tnp_ISL3
MarR_2
HTH_27
HTH_3
HTH_10
HTH_Tnp_4
Trp_repressor
YdaS_toxin
OrfB_IS605
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ULR55807
LinkDB
All DBs
Position
449231..450058
Genome browser
AA seq
275 aa
AA seq
DB search
MADGVDLPLIEDPSQVRPKDAREMSRQFFDRLAMLEEGTHTYQYVRNTLIEMNLSLVRYA
ASRFRGREDSLEDIVQVGTIGLIKAIDRFELSREVEFTTFAVPYIVGEIKRFFRDTSWAV
HVPRRLQEARVELARATDELQSRLGRMPTTRELSELMSLSEEEVIEARKASNGYNTSSLD
AALTSDGGEDGDTVLGDLIGEEDHAMRLVEDFHSLAPLIAELDDRERRILHLRFVEEQTQ
SQIAEQLGVSQMHVSRLISRIIKRLRAGLLEPGVA
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggggtggacctgcccctgatcgaggacccgtcgcaggtgaggcccaaggac
gcgcgggagatgtcccggcagttcttcgaccggctggccatgctggaagaaggcacccat
acctatcagtacgtacgcaatacgctcatcgagatgaacctctccctcgtgcggtacgcg
gcctcgcgtttccgcgggcgtgaggactccctggaggacatcgtccaggtcgggaccatc
gggctgatcaaggccatcgaccggttcgagctgtcccgggaggtggagttcaccacgttc
gccgtgccgtacatcgtcggcgagatcaagcggttcttccgggacaccagctgggcggtg
cacgtaccgcggcggctgcaggaggcgcgggtggagctggcccgcgcgacggacgagctg
cagtcccggctgggccggatgccgacgacgcgtgagctgtcggagctgatgtcgctgtcc
gaggaggaggtcatcgaggcgcgcaaggcgtccaacggctacaacacctcctcgctcgac
gcggcgctcacctccgacggcggcgaggacggcgacaccgtgctgggcgacctcatcggc
gaggaggaccacgcgatgcgcctcgtggaggacttccactcgctggcgccgctgatcgcc
gaactcgacgaccgtgagcggcggatcctgcatctgcggttcgtggaggaacagacccag
tcgcagatcgccgagcagctcggggtgtcgcagatgcatgtgtcccggctgatcagccgc
atcatcaagcggctgcgcgcgggcctgctggaacccggagtcgcctga
DBGET
integrated database retrieval system
