Streptomyces deccanensis: L3078_07530
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Entry
L3078_07530 CDS
T08215
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sdec
Streptomyces deccanensis
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sdec03400
]
L3078_07530
DNA repair and recombination proteins [BR:
sdec03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L3078_07530
Archaeal homologous recombinant proteins
L3078_07530
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Metallophos_3
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
ULR49142
LinkDB
All DBs
Position
complement(1691632..1692795)
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AA seq
387 aa
AA seq
DB search
MRILHTSDWHLGRSFHRVNMLGAQAEFIGRLVATVRERDVDAVVVAGDVYDRAVPPLAAV
ELFDDALHRLAELGVPTVMISGNHDSARRLGVAAGLIGRAGIHLRTSASAAGTPVTLPDA
HGDVAFYGLPYLEPALVKDELGVEKAGHEAVLAAAMDRVRADLAGRPAGTRSVVLAHAFV
TGGQPSDSERDISVGGVSAVPAGVFDGVDYVALGHLHGSQTLTDRVRYSGSPLPYSFSEA
DHRKSMWLVDLGADGSVDAERIDCPVPRPLARIRGRLDDLLADPDLARHEEAWVEATLTD
PVRPAEPMARLCARFPHTLSLVFDPERAPGDPDVSYARRLAGRDDQEIAEDFVAHVRGTG
PDAHERTVLRDAFDAVRADETVREVAR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
ttgagaattctgcacacatccgactggcatctcggccggtcgttccaccgcgtgaacatg
ctcggcgcgcaggccgagttcatcggtcggctggtcgcgacggtgcgggaacgcgacgtg
gacgcggtggtcgtggcgggcgacgtgtacgaccgggcggtgccgccgctggccgcggtc
gaactcttcgacgacgccctgcaccgcctggccgagctgggcgtgcccacggtgatgatc
tccgggaaccacgactcggcgcgacggctcggcgtcgcggcgggcctcatcggccgggcc
ggcatccacctgcgaacgtcggcctcggccgccggcacccccgtgaccctcccggacgcc
cacggcgacgtcgccttctacggcctgccctatctcgaacccgccctcgtgaaggacgag
ctcggggtcgagaaggcgggccacgaagcggtgctcgccgccgccatggaccgggtccgg
gccgacctggccgggcggccggcgggcacccgttccgtggtcctggcccacgccttcgtc
accggcggccaacccagcgacagcgagcgggacatctccgtcggcggcgtctccgccgtg
cccgccggtgtcttcgacggcgtcgactacgtggcgctgggccatctgcacggcagccag
accctcaccgaccgggtgcgctactccggttccccgctgccgtactccttctccgaggcc
gaccaccgcaagagcatgtggctggtggacctcggcgccgacgggtcggtcgacgccgag
cggatcgactgccccgtgccccgccccctcgcccggatccgggggcggctggacgacctg
ctcgccgacccggacctggcccgccacgaggaggcctgggtcgaggccaccctcaccgac
cccgtccggcccgccgagcccatggcccggctgtgcgcacgcttcccacacaccctcagc
ctcgtcttcgaccccgaacgggcccccggcgaccccgacgtctcctacgcccggcgcctc
gccggccgggacgaccaggagatcgccgaggacttcgtggcccacgtccgcggcaccggc
cccgacgcacacgaacggaccgtgctcagggacgcgttcgacgccgtacgggccgacgag
acggtccgggaggtcgcccgatga
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