Streptomyces deccanensis: L3078_08320
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Entry
L3078_08320 CDS
T08215
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
sdec
Streptomyces deccanensis
Pathway
sdec02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L3078_08320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdec02000
]
L3078_08320
Transporters [BR:
sdec02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
L3078_08320
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
Rad17
AAA_22
SMC_N
ABC_ATPase
AAA_28
ORC-CDC6-like
AAA
SRP54
AAA_25
nSTAND_NTPase5
AAA_17
Motif
Other DBs
NCBI-ProteinID:
ULR49292
LinkDB
All DBs
Position
complement(1866776..1867849)
Genome browser
AA seq
357 aa
AA seq
DB search
MTVLEKTVTDTAATVEFRGLRREFGATVALDGLDLTVRPGELLALLGPSGCGKTTALRML
AGFEHPDAGEVLVDGEDVTRVPAHRRDAGMVFQSYSLFPHLSALDNVAFGLRMRKVRTAE
RRSRAAELLDLVGLADKGAQYPHQLSGGQQQRVALARALALRPRVLLLDEPLSALDAKVR
LTLREEIRRLQQELGITTLFVTHDQEEALSMADRVAVMHAGRLEQCATPVELYGRPATAF
VAEFVGTMSRIPGRLDGTTVEVLGLRLPVDGTAPTTPEVDVLVRPETVAVRADDTGDARV
VATAFLGAATRLTVRLADGTEVKADLPTHEAAALGAGSSVTVSLPERPVLVAARPAG
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgcttgagaagaccgtgaccgacaccgccgccaccgtcgaattccgtggcctg
cgacgggagttcggcgccaccgtcgccctcgacggcctcgacctgaccgtgcgccccggc
gaactgctcgccctcctcggcccctccggctgcggcaagaccaccgccctgcggatgctc
gccggcttcgaacaccccgacgccggcgaggtgctggtcgacggcgaggacgtcacccgt
gtcccggcccaccggcgcgacgccgggatggtcttccagtcgtacagcctctttccccac
ctcagcgccctcgacaacgtggccttcgggctgcgtatgcgcaaggtacgcacggccgaa
cggcggtccagggcggccgagttgctcgacctcgtgggcctcgccgacaagggtgcccag
tacccgcaccagctctccggcggccagcagcagcgcgtcgccctcgcccgggcgctcgcc
ctgcgcccccgtgtcctgctgctcgacgaaccgctctccgccctcgacgccaaggtgcgg
ctcaccctccgcgaggagatccgccggctccagcaggagctgggcatcaccaccctcttc
gtgacgcacgaccaggaggaggccctctccatggccgaccgggtcgccgtgatgcacgcc
ggacggctcgaacagtgcgccacccccgtcgagttgtacggccgccccgccaccgccttc
gtcgccgagttcgtcggcaccatgagccggatcccgggacggctggacgggacgacggtc
gaggtgctgggcctgcggctgcccgtcgacgggacggcacccaccaccccggaggtcgac
gtcctcgtccggcccgagacggtcgccgtgcgggcggacgacaccggcgacgcccgcgtc
gtcgccaccgcgttcctcggcgccgccacccgcctcaccgtacggctcgccgacggcacc
gaggtcaaggccgacctgcccacccacgaggcggcggccctcggcgccggaagctccgtg
accgtcagcctccccgagcggccggtgctcgtggcggcccgccccgccggctga
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