Streptomyces deccanensis: L3078_08405
Help
Entry
L3078_08405 CDS
T08215
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
sdec
Streptomyces deccanensis
Pathway
sdec03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
L3078_08405 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdec03021
]
L3078_08405 (rpoZ)
03400 DNA repair and recombination proteins [BR:
sdec03400
]
L3078_08405 (rpoZ)
Enzymes [BR:
sdec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
L3078_08405 (rpoZ)
Transcription machinery [BR:
sdec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
L3078_08405 (rpoZ)
DNA repair and recombination proteins [BR:
sdec03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
L3078_08405 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ULR49309
LinkDB
All DBs
Position
complement(1888705..1888974)
Genome browser
AA seq
89 aa
AA seq
DB search
MSSSISAPEGIINPPIDELLEATDSKYSLVIYAAKRARQINAYYSQLGEGLLEYVGPLVD
THVHEKPLSIALREINAGLLTSEAVEGPA
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctcttccatctccgcgcccgagggcatcatcaacccgccgatcgacgagctcctc
gaggccaccgactcgaagtacagcctcgtgatctacgcggccaagcgtgcccgccagatc
aacgcgtactactcgcagctcggcgagggcctcctcgagtacgtcggtcccctcgtcgac
acccacgtccacgagaagccgctctcgatcgccctgcgcgagatcaacgcgggtctgctg
acgtccgaggccgtcgagggccccgcgtaa
DBGET
integrated database retrieval system
