Streptomyces deccanensis: L3078_08540
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Entry
L3078_08540 CDS
T08215
Symbol
rpsD
Name
(GenBank) 30S ribosomal protein S4
KO
K02986
small subunit ribosomal protein S4
Organism
sdec
Streptomyces deccanensis
Pathway
sdec03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
L3078_08540 (rpsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sdec03011
]
L3078_08540 (rpsD)
Ribosome [BR:
sdec03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
L3078_08540 (rpsD)
Bacteria
L3078_08540 (rpsD)
Archaea
L3078_08540 (rpsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S4
Ribosomal_S4
SYY_C-terminal
Acetate_kinase
Motif
Other DBs
NCBI-ProteinID:
ULR49334
LinkDB
All DBs
Position
complement(1917407..1918021)
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AA seq
204 aa
AA seq
DB search
MANQSRPKVKKSRALGIALTPKAVKYFEARPYPPGEHGRGRKQNSDYKVRLLEKQRLRAQ
YDVSERQLVRAYERASKVQGKTGEALIIELERRLDALVLRSGIARTIYQARQMVVHGHIE
VNGHKVDKPSFRVKPDDVVMVRERSRQKPLFEVAREGGFAADGETPRYLQVNLKALAFRL
DRDPNRKEIPVICDEQLVVEYYAR
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaaccagtcccgccccaaggtcaagaagtcgcgtgccctcggcatcgcgctgacc
ccgaaggccgtcaagtacttcgaggcccgcccctacccgccgggtgagcacggccgcggc
cgcaagcagaactcggactacaaggtccgtctgctcgagaagcagcgtctgcgcgcgcag
tacgacgtgtccgagcgtcagctcgtccgcgcctacgagcgtgcctccaaggtccagggc
aagaccggtgaggccctgatcatcgagctcgagcgccgtctcgacgcgctggtcctgcgt
tcgggcatcgcccgcacgatctaccaggcccgccagatggtcgtccacggccacatcgag
gtcaacggccacaaggtcgacaagccgtccttccgcgtcaagccggacgacgtcgtcatg
gttcgcgagcgcagccgtcagaagccgctgttcgaggtcgcccgcgagggtggcttcgcc
gccgacggcgagaccccgcgctacctccaggtgaacctgaaggccctggccttccgcctg
gaccgcgacccgaaccgcaaggagatcccggtcatctgcgacgagcagctcgtcgtcgag
tactacgcccgttga
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integrated database retrieval system