Streptomyces deccanensis: L3078_14810
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Entry
L3078_14810 CDS
T08215
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
sdec
Streptomyces deccanensis
Pathway
sdec02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sdec00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L3078_14810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sdec03021
]
L3078_14810
Transcription machinery [BR:
sdec03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L3078_14810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_28
LexA_DNA_bind
KORA
Motif
Other DBs
NCBI-ProteinID:
ULR50469
LinkDB
All DBs
Position
complement(3314413..3315732)
Genome browser
AA seq
439 aa
AA seq
DB search
MPESSERGRPVPHGSEIPAVPLDEYGMDGGEAARAIPDVPLPYALAATFLEVAPVQTQTL
IQNDTSTAIGTDGSEPAEETDVITAVPAQSRAAHHPEAAPDGPPDLDEPPAAVVEALETA
EPPEPVELPRARPDTSGPSSDLFRQYLREIGRIPLLTAAEEVELARRVEAGLFAEERLGH
ARDLDTQLALDLDKLVVMGRMAKRRLIEANLRLVVSVAKRYVGRGLTMLDLVQEGNLGLI
RAVEKFDYARGYKFSTYATWWIRQAMSRALADQARTIRVPVHVVELINRVVRVQRRMLQE
RGYEPTPEEVAAHLDLAPERVSEVLRLAQEPVSLHAPVGEEDDVALGDLIEDGDAASPVE
SAAFLLLREHLEAVLSTLGERERKVVQLRYGLADGRPRTLEEIGRIFGVTRERIRQIESK
TLNKLRDHAFADQLRGYLD
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagtcctcggagcgcggccgacccgtcccccatgggtccgagatccccgcggtt
ccgctcgatgagtacgggatggacggcggagaggccgcccgcgccatcccagacgtaccg
ctgccgtacgccctggcagcgacattcctggaggtcgcccccgtgcagacccagaccctc
atacagaacgacaccagtacggccatcggtaccgacggctcggagccggccgaggagacc
gatgtcatcaccgcggtgcccgcccagagccgcgccgcgcaccaccccgaggcggccccg
gacggcccgcccgacctggacgaaccgcctgccgcggtggtcgaggccctggagacggcc
gagcctcccgagcccgtggagctgccacgcgcccgcccggacaccagcggaccctcctcc
gacctcttccgccagtacctgcgtgagatcggccgtatcccgctcctgacggccgcggag
gaggtggagctggcccgccgcgtcgaggccggcctcttcgccgaggagcggctcggccac
gcccgcgacctcgacacccagctcgccctcgacctcgacaagctggtcgtcatgggccgc
atggccaaacgccgcctgatcgaggcgaacctgcggctcgtcgtctccgtggcgaagcgt
tacgtcggccgcggcctgaccatgctggacctggtccaggaaggaaacctgggcctgatc
agggccgtcgagaagttcgactacgcgcgcggctacaagttctcgacctacgccacctgg
tggatccgccaggccatgtcccgagccctggccgaccaggcccgcaccatccgggtcccg
gtccacgtggtcgagttgatcaaccgggtcgtccgcgtccaacgccgcatgctccaggaa
cggggctacgagcccacgcccgaggaggtcgccgcccacctcgacctggcgcccgagcgc
gtcagcgaggtcctccgcctcgcccaggaaccggtctcgctccacgcgcccgtgggcgag
gaggacgacgtggccctcggcgacctcatcgaggacggcgacgcggcgagccccgtggag
tcggccgcgttcctgctgctcagggagcatctggaggcggtcctctccaccctgggcgag
cgggaacgcaaggtggtccaactccgctacggcctcgcggacggccgcccccgcacgctg
gaggagataggccgcatcttcggcgtcacccgggaacggatacgccagatcgagtccaag
accctgaacaaactcagggaccacgccttcgcggaccagctgcgggggtacttggactga
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